Evidence map›Paper›PMID 37724874›Full record

ArticleJournal of clinical microbiology2023

Diagnostic performance of host protein signatures as a triage test for active pulmonary TB.

Lisa Koeppel, Claudia M Denkinger, Romain Wyss, Tobias Broger, Novel N Chegou, Jill M Dunty, Kerry Scott, Tatiana Cáceres, Elloise Dutoit, Cesar Ugarte-Gil and 12 more

Abstract read
In one paragraph

Article in Journal of clinical microbiology, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed, 1 pooled it
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 1 synthesis or guideline pooled it.

  1. Pooled it
  2. Review
  3. Article
  4. Article
  5. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

22 authors.

Lisa KoeppelDivision of Infectious Disease and Tropical Medicine, University of Heidelberg , Heidelberg, Germany.
Claudia M DenkingerDivision of Infectious Disease and Tropical Medicine, University of Heidelberg , Heidelberg, Germany.ORCID 0000-0002-7216-7067
Romain WyssFIND , Geneva, Switzerland.
Tobias BrogerDivision of Infectious Disease and Tropical Medicine, University of Heidelberg , Heidelberg, Germany.
Novel N ChegouDSI-NRF Centre of Excellence for Biomedical Tuberculosis Research, South African Medical Research Council Centre for Tuberculosis Research, Division of Molecular Biology and Human Genetics, Faculty of Medicine and Health Sciences, Stellenbosch University , Cape Town, South Africa.
Jill M DuntyMeso Scale Diagnostics, LLC , Rockville, Maryland, USA.
Kerry ScottMeso Scale Diagnostics, LLC , Rockville, Maryland, USA.
Tatiana CáceresInstituto de Medicina Tropical Alexander von Humboldt, Universidad Peruana Cayetano Heredia , Lima, Peru.
Elloise DutoitDivision of Medical Microbiology at the University of Cape Town (UCT) , Cape Town, South Africa.
Cesar Ugarte-GilInstituto de Medicina Tropical Alexander von Humboldt, Universidad Peruana Cayetano Heredia , Lima, Peru.
Mark NicolDivision of Medical Microbiology at the University of Cape Town (UCT) , Cape Town, South Africa.
Eduardo GotuzzoInstituto de Medicina Tropical Alexander von Humboldt, Universidad Peruana Cayetano Heredia , Lima, Peru.
Paul L A M CorstjensDepartment of Cell and Chemical Biology, Leiden University Medical Center , Leiden, the Netherlands.
Annemieke GelukDepartment of Infectious Diseases, Leiden University Medical Center , Leiden, the Netherlands.
Jayne SutherlandTB Research Group, Vaccines and Immunity Theme, MRC Unit The Gambia at LSHTM , Banjul, Gambia.
George B SigalMeso Scale Diagnostics, LLC , Rockville, Maryland, USA.
Emmanuel MoreauFIND , Geneva, Switzerland.
Audrey AlbertiniFIND , Geneva, Switzerland.
Anna MantsokiFIND , Geneva, Switzerland.
Stefano OngarelloFIND , Geneva, Switzerland.
Gerhard WalzlDSI-NRF Centre of Excellence for Biomedical Tuberculosis Research, South African Medical Research Council Centre for Tuberculosis Research, Division of Molecular Biology and Human Genetics, Faculty of Medicine and Health Sciences, Stellenbosch University , Cape Town, South Africa.
Marta Fernandez SuarezFIND , Geneva, Switzerland.

Funding

Medical Research Council MC_U190071468Medical Research Council MC_UU_00031/6
6 · The paper itself

Abstract

The current four-symptom screen recommended by the World Health Organization (WHO) is widely used as screen to initiate diagnostic testing for active pulmonary tuberculosis (TB), yet the performance is poor especially when TB prevalence is low. In contrast, more sensitive molecular tests are less suitable for placement at primary care level in low-resource settings. In order to meet the WHO End TB targets, new diagnostic approaches are urgently needed to find the missing undiagnosed cases. Proteomics-derived blood host biomarkers have been explored because protein detection technologies are suitable for the point-of-care setting and could meet cost targets. This study aimed to find a biomarker signature that fulfills WHO's target product profile (TPP) for a TB screening. Twelve blood-based protein biomarkers from three sample populations (Vietnam, Peru, and South Africa) were analyzed individually and in combinations via advanced statistical methods and machine learning algorithms. The combination of I-309, SYWC and kallistatin showed the most promising results to discern active TB throughout the data sets meeting the TPP for a triage test in adults from two countries (Peru and South Africa). The top-performing individual markers identified at the global level (I-309 and SYWC) were also among the best-performing markers at country level in South Africa and Vietnam. This analysis clearly shows that a host protein biomarker assay is feasible in adults for certain geographical regions based on one or two biomarkers with a performance that meets minimal WHO TPP criteria.

Indexed as

Mycobacterium tuberculosisTuberculosisTuberculosis, PulmonaryAdultBiomarkersBlood ProteinsHumansSensitivity and SpecificityTriageBiomarkersBlood Proteinsbiomarkerdiagnosticshost markermachine learningMycobacterium tuberculosis

Identifiers

PMID37724874
PMCPMC10654108

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.