Evidence map›Paper›PMID 37724773›Full record

SynthesisStatistics in medicine2023

Bayesian hierarchical models incorporating study-level covariates for multivariate meta-analysis of diagnostic tests without a gold standard with application to COVID-19.

Zheng Wang, Thomas A Murray, Mengli Xiao, Lifeng Lin, Demissie Alemayehu, Haitao Chu

Abstract readMeta-Analysis
In one paragraph

Synthesis in Statistics in medicine, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Zheng WangDivision of Biostatistics, School of Public Health, University of Minnesota, Minneapolis, Minnesota, USA.ORCID 0000-0002-1083-5269
Thomas A MurrayDivision of Biostatistics, School of Public Health, University of Minnesota, Minneapolis, Minnesota, USA.ORCID 0000-0003-2769-4957
Mengli XiaoDepartment of Biostatistics and Informatics, University of Colorado Anschutz Medical Campus, Aurora, Colorado, USA.
Lifeng LinDepartment of Epidemiology and Biostatistics, University of Arizona, Tucson, Arizona, USA.ORCID 0000-0002-3562-9816
Demissie AlemayehuGlobal Biometrics and Data Management, Pfizer Inc., New York, New York, USA.
Haitao ChuDivision of Biostatistics, School of Public Health, University of Minnesota, Minneapolis, Minnesota, USA.ORCID 0000-0003-0932-598X

Funding

NIH Prior Approval Process ProfessionalUL1TR002535 · NCATS · UNIVERSITY OF COLORADO DENVER · PI SOKOL, RONALD J. · 2018 to 2022
$51.1M
University of Minnesota Clinical and Translational Science Institute (UMN CTSI)UL1TR002494 · NCATS · UNIVERSITY OF MINNESOTA · PI BLAZAR, BRUCE R, WEISDORF, DANIEL J · 2018 to 2022
$34.9M
Statistical Methods and Software for Multivariate Meta-analysisR01LM012982 · NLM · UNIVERSITY OF MINNESOTA · PI LIN, LIFENG, SIEGEL, LIANNE · 2019 to 2022
$1.3M
Joint modeling of continuous and binary data in meta-analysisR03MH128727 · NIMH · UNIVERSITY OF ARIZONA · PI LIN, LIFENG · 2022 to 2023
$146k
NCATS NIH HHS UL1 TR002494NCATS NIH HHS UL1 TR002535NCATS NIH HHS UL1-TR002535NIMH NIH HHS R03 MH128727NLM NIH HHS R01 LM012982
6 · The paper itself

Abstract

When evaluating a diagnostic test, it is common that a gold standard may not be available. One example is the diagnosis of SARS-CoV-2 infection using saliva sampling or nasopharyngeal swabs. Without a gold standard, a pragmatic approach is to postulate a "reference standard," defined as positive if either test is positive, or negative if both are negative. However, this pragmatic approach may overestimate sensitivities because subjects infected with SARS-CoV-2 may still have double-negative test results even when both tests exhibit perfect specificity. To address this limitation, we propose a Bayesian hierarchical model for simultaneously estimating sensitivity, specificity, and disease prevalence in the absence of a gold standard. The proposed model allows adjusting for study-level covariates. We evaluate the model performance using an example based on a recently published meta-analysis on the diagnosis of SARS-CoV-2 infection and extensive simulations. Compared with the pragmatic reference standard approach, we demonstrate that the proposed Bayesian method provides a more accurate evaluation of prevalence, specificity, and sensitivity in a meta-analytic framework.

Indexed as

COVID-19Bayes TheoremCOVID-19 TestingDiagnostic Tests, RoutineHumansSARS-CoV-2Sensitivity and SpecificityBayesian hierarchical modeldiagnostic testdouble negativesmeta-analysisSARS-CoV-2 infection diagnosissensitivityspecificity

Identifiers

PMID37724773
PMCPMC12449392

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LicenceCC BY-NC
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.