Evidence map›Paper›PMID 37722033›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2023

Compression drives diverse transcriptomic and phenotypic adaptations in melanoma.

Xingjian Zhang, Xin Shi, Dingyao Zhang, Xiangyu Gong, Zhang Wen, Israel Demandel, Junqi Zhang, Alejandro Rossello-Martinez, Trevor J Chan, Michael Mak

Open access · greenAbstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 14 papers.

0numbers the graph read from it
0cells of the map it votes in
14citing papers in PubMed
3.3field-weighted citation impact, top 8% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

14 citing papers in PubMed, 16 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Review
  5. Extracellular Matrix Viscoelasticity Regulates Mammary Branching Morphogenesis.Advanced science (Weinheim, Baden-Wurttemberg, Germany) · 2026
    Article
  6. Article
  7. Article
  8. Article
  9. Vessel-On-A-Chip Coupled Proteomics Reveal Pressure-Overload-Induced Vascular Remodeling.Advanced science (Weinheim, Baden-Wurttemberg, Germany) · 2025
    Article
  10. Review
  11. Mechanical signatures in cancer metastasis.npj biological physics and mechanics · 2025
    Review
  12. Article
  13. Review
  14. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 4 institutions in 2 countries.

Xingjian ZhangDepartment of Biomedical Engineering, Yale University, New Haven, CT 06511.ORCID 0000-0003-1369-6556
Xin ShiSchool of Chemical Engineering and Technology, Tianjin University, Tianjin 300350, China.ORCID 0009-0009-1452-0975
Dingyao ZhangDepartment of Biomedical Engineering, Yale University, New Haven, CT 06511.
Xiangyu GongDepartment of Biomedical Engineering, Yale University, New Haven, CT 06511.
Zhang WenDepartment of Biomedical Engineering, Yale University, New Haven, CT 06511.
Israel DemandelDepartment of Biomedical Engineering, Yale University, New Haven, CT 06511.ORCID 0000-0002-0322-6289
Junqi ZhangDepartment of Biomedical Engineering, Yale University, New Haven, CT 06511.ORCID 0000-0002-0001-4555
Alejandro Rossello-MartinezDepartment of Biomedical Engineering, Yale University, New Haven, CT 06511.
Trevor J ChanDepartment of Bioengineering, University of Pennsylvania, Philadelphia, PA 19104.
Michael MakDepartment of Biomedical Engineering, Yale University, New Haven, CT 06511.ORCID 0000-0001-6881-8130
Yale University · USYale Cancer Center · USTianjin University · CNUniversity of Pennsylvania · US

Funding

(PQ5) Mitochondrial Heterogeneity in Melanoma Tumor and Immune ResponsesR01CA216101 · NCI · SALK INSTITUTE FOR BIOLOGICAL STUDIES · PI GERALD SHADEL · 2018 to 2026
$5.0M
TRANSFER GRANT: Systems Biophysics of Multiscale State Transitions in Cells and TissuesR35GM142875 · NIGMS · YALE UNIVERSITY · PI Michael MAK · 2021 to 2026
$2.7M
NCI NIH HHS R01 CA216101NIGMS NIH HHS R35 GM142875
6 · The paper itself

Abstract

Physical forces are prominent during tumor progression. However, it is still unclear how they impact and drive the diverse phenotypes found in cancer. Here, we apply an integrative approach to investigate the impact of compression on melanoma cells. We apply bioinformatics to screen for the most significant compression-induced transcriptomic changes and investigate phenotypic responses. We show that compression-induced transcriptomic changes are associated with both improvement and worsening of patient prognoses. Phenotypically, volumetric compression inhibits cell proliferation and cell migration. It also induces organelle stress and intracellular oxidative stress and increases pigmentation in malignant melanoma cells and normal human melanocytes. Finally, cells that have undergone compression become more resistant to cisplatin treatment. Our findings indicate that volumetric compression is a double-edged sword for melanoma progression and drives tumor evolution.

Indexed as

MelanomaTranscriptomeGene Expression ProfilingHumansMelanocytesPhenotypeadaptationbiophysicscompressionmelanomaphenotype

Identifiers

PMID37722033
PMCPMC10523457
OpenAlexW4386824196

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.