Evidence map›Paper›PMID 37721906›Full record

ArticleBiomedica : revista del Instituto Nacional de Salud2023

Phenotypic and genotypic characterization of Colombian clinical isolates of Sporothrix spp.

Laura C Álvarez-Acevedo, María C Zuleta-González, Óscar M Gómez-Guzmán, Álvaro L Rúa-Giraldo, Orville Hernández-Ruiz, Juan G McEwen-Ochoa, Martha E Urán-Jiménez, Myrtha Arango-Arteaga, Rosely M Zancopé-Oliveira, Manoel Marques Evangelista de Oliveira and 1 more

Open access · diamondAbstract read
In one paragraph

Article in Biomedica : revista del Instituto Nacional de Salud, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
0.2field-weighted citation impact, top 41% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed, 1 citations in OpenAlex.

  1. Current Insights intoJournal of fungi (Basel, Switzerland) · 2025
    Article
  2. Analyses of the Genetic Diversity and Population Structures ofJournal of fungi (Basel, Switzerland) · 2024
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 2 institutions in 2 countries.

Laura C Álvarez-AcevedoGrupo de Micología Médica, Departamento de Microbiología y Parasitología, Facultad de Medicina, Universidad de Antioquia, Medellín, Colombia; Posgrado de Biología, Instituto de Biología, Facultad de Ciencias Exactas y Naturales, Universidad de Antioquia, Medellín, Colombia. laurac.alvarez@udea.edu.co.
María C Zuleta-GonzálezGrupo de Micología Médica, Departamento de Microbiología y Parasitología, Facultad de Medicina, Universidad de Antioquia, Medellín, Colombia. mariaca1122@hotmail.com.
Óscar M Gómez-GuzmánPosgrado de Biología, Instituto de Biología, Facultad de Ciencias Exactas y Naturales, Universidad de Antioquia, Medellín, Colombia; Grupo de Biología Celular y Molecular, Corporación para Investigaciones Biológicas, Universidad de Antioquia, Medellín, Colombia. oscargomez24@hotmail.com.
Álvaro L Rúa-GiraldoGrupo de Micología Médica, Departamento de Microbiología y Parasitología, Facultad de Medicina, Universidad de Antioquia, Medellín, Colombia; Escuela de Microbiología, Universidad de Antioquia, Medellín, Colombia. alvaro.rua@udea.edu.co.
Orville Hernández-RuizGrupo de Biología Celular y Molecular, Corporación para Investigaciones Biológicas, Universidad de Antioquia, Medellín, Colombia; Escuela de Microbiología, Universidad de Antioquia, Medellín, Colombia. orville.hernandez@udea.edu.co.
Juan G McEwen-OchoaGrupo de Micología Médica, Departamento de Microbiología y Parasitología, Facultad de Medicina, Universidad de Antioquia, Medellín, Colombia; Grupo de Biología Celular y Molecular, Corporación para Investigaciones Biológicas, Universidad de Antioquia, Medellín, Colombia. juan.mcewen@udea.edu.co.
Martha E Urán-JiménezGrupo de Micología Médica, Departamento de Microbiología y Parasitología, Facultad de Medicina, Universidad de Antioquia, Medellín, Colombia. martha.uran@udea.edu.co.
Myrtha Arango-ArteagaGrupo de Micología Médica, Departamento de Microbiología y Parasitología, Facultad de Medicina, Universidad de Antioquia, Medellín, Colombia. myrtharango@yahoo.com.
Rosely M Zancopé-OliveiraLaboratorio de Micología, Instituto Nacional de Infectología Evandro Chagas, Fundação Oswaldo Cruz, Rio de Janeiro, RJ, Brazil. rzancope@gmail.com.
Manoel Marques Evangelista de OliveiraLaboratorio de Micología, Instituto Nacional de Infectología Evandro Chagas, Fundação Oswaldo Cruz, Rio de Janeiro, RJ, Brazil. manoel.marques@ini.fiocruz.br.
María Del P Jiménez-AlzateGrupo de Micología Médica, Departamento de Microbiología y Parasitología, Facultad de Medicina, Universidad de Antioquia, Medellín, Colombia. delpilar.jimenez@udea.edu.co.
Universidad de Antioquia · COInstituto Evandro Chagas · BR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

introductionFor over a century, Sporothrix schenckii was considered the sole species responsible for sporotrichosis. In 2007, scientific community confirmed the disease could be caused by various Sporothrix species. These species differed in their virulence factors and their antifungal sensitivity.

objectiveThis study aims to characterize 42 Colombian clinical isolates of Sporothrix spp. phenotypically and genotypically. MATERIAL AND

methodsForty-two clinical isolates were characterized using phenotypic methods. It involved various culture media to determine their growth range at different temperatures and to assess the type and distribution of pigment and colony texture. Microscopic morphology was evaluated through microcultures, as well as the conidia diameter, type of sporulation, and morphology. Additionally, the assimilation of carbohydrates was selected as a physiological trait for species identification. Genotyping of 40 isolates was performed through partial amplification of the calmodulin gene, followed by sequence analysis.

resultsMolecular studies enabled the identification of 32 isolates of S. schenckii and 8 isolates of S. globosa. The combination of phenotypic and genotypic methods eased these species characterizations and the recognition keys development based on parameters such as growth diameter at 25 and 30 ºC, colony texture (membranous or velvety) on potato dextrose agar, and microscopic morphology with predominance of pigmented triangular, elongated oval globose, or subglobose conidia.

conclusionsConfirmation of the phenotypic characteristics and molecular analysis is crucial for identifying Sporothrix species and determining adequate treatment. This study represents the first phenotypical and genotypical characterization of clinical isolates of Sporothrix spp. reported in Colombia.

Indexed as

SporothrixAntifungal AgentsColombiaCulture MediaGenotypePhenotypeAntifungal AgentsCulture MediafenotipogenotipoSporothrixsporotricosis

Identifiers

PMID37721906
PMCPMC10599711
OpenAlexW4386828995

What OpenQuestion holds

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.