Evidence map›Paper›PMID 37720084›Full record

ArticleiScience2023

Genetic signature detected in T cell receptors from patients with severe COVID-19.

Manuel Corpas, Carmen de Mendoza, Víctor Moreno-Torres, Ilduara Pintos, Pedro Seoane, James R Perkins, Juan A G Ranea, Segun Fatumo, Tamas Korcsmaros, José Manuel Martín-Villa and 3 more

Abstract read
In one paragraph

Article in iScience, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed.

  1. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors.

Manuel CorpasSchool of Life Sciences, University of Westminster, London, UK.
Carmen de MendozaPuerta de Hierro University Hospital & Research Institute, Majadahonda, Spain.
Víctor Moreno-TorresUNIR Health Sciences School & Medical Center, Madrid, Spain.
Ilduara PintosPuerta de Hierro University Hospital & Research Institute, Majadahonda, Spain.
Pedro SeoaneDepartment of Molecular Biology and Biochemistry, University of Málaga, Málaga, Spain.
James R PerkinsDepartment of Molecular Biology and Biochemistry, University of Málaga, Málaga, Spain.
Juan A G RaneaDepartment of Molecular Biology and Biochemistry, University of Málaga, Málaga, Spain.
Segun FatumoThe African Computational Genomics (TACG) Research Group, MRC/UVRI and LSHTM, Entebbe, Uganda.
Tamas KorcsmarosFaculty of Medicine, Department of Metabolism, Digestion and Reproduction, Imperial College London, London, UK.
José Manuel Martín-VillaDepartment of Immunology, Complutense University and IIS Gregorio Marañón, Madrid, Spain.
Pablo BarreiroUNIR Health Sciences School & Medical Center, Madrid, Spain.
Octavio CorralUNIR Health Sciences School & Medical Center, Madrid, Spain.
Vicente SorianoUNIR Health Sciences School & Medical Center, Madrid, Spain.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Characterization of host genetic factors contributing to COVID-19 severity promises advances on drug discovery to fight the disease. Most genetic analyses to date have identified genome-wide significant associations involving loss-of-function variants for immune response pathways. Despite accumulating evidence supporting a role for T cells in COVID-19 severity, no definitive genetic markers have been found to support an involvement of T cell responses. We analyzed 205 whole exomes from both a well-characterized cohort of hospitalized severe COVID-19 patients and controls. Significantly enriched high impact alleles were found for 25 variants within the T cell receptor beta (TRB) locus on chromosome 7. Although most of these alleles were found in heterozygosis, at least three or more in

Indexed as

GeneticsGenomicsImmunologyVirology

Identifiers

PMID37720084
PMCPMC10504482

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.