Evidence map›Paper›PMID 37719141›Full record

ArticleCell genomics2023

Multiple genes in a single GWAS risk locus synergistically mediate aberrant synaptic development and function in human neurons.

Siwei Zhang, Hanwen Zhang, Marc P Forrest, Yifan Zhou, Xiaotong Sun, Vikram A Bagchi, Alena Kozlova, Marc Dos Santos, Nicolas H Piguel, Leonardo E Dionisio and 5 more

Open access · goldAbstract read
In one paragraph

Article in Cell genomics, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 24 papers.

0numbers the graph read from it
0cells of the map it votes in
24citing papers in PubMed
7.2field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

24 citing papers in PubMed, 24 citations in OpenAlex.

  1. Article
  2. Review
  3. Article
  4. Article
  5. Article
  6. Loss of function of the chromatin remodeling geneProceedings of the National Academy of Sciences of the United States of America · 2026
    Article
  7. Article
  8. Article
  9. Article
  10. Article
  11. Article
  12. Psychiatric Genomics 2025: State of the Art and the Path Forward.The Psychiatric clinics of North America · 2025
    Review
  13. Article
  14. Article
  15. Review
  16. Article
  17. Review
  18. Review
  19. Alzheimer's disease protective allele ofmedRxiv : the preprint server for health sciences · 2024
    Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

15 authors at 4 institutions in 1 country.

Siwei ZhangCenter for Psychiatric Genetics, NorthShore University HealthSystem, Evanston, IL 60201, USA.
Hanwen ZhangCenter for Psychiatric Genetics, NorthShore University HealthSystem, Evanston, IL 60201, USA.
Marc P ForrestDepartment of Neuroscience, Northwestern University, Chicago, IL 60611, USA.
Yifan ZhouDepartment of Human Genetics, University of Chicago, Chicago, IL 60637, USA.
Xiaotong SunDepartment of Human Genetics, University of Chicago, Chicago, IL 60637, USA.
Vikram A BagchiDepartment of Neuroscience, Northwestern University, Chicago, IL 60611, USA.
Alena KozlovaCenter for Psychiatric Genetics, NorthShore University HealthSystem, Evanston, IL 60201, USA.
Marc Dos SantosDepartment of Neuroscience, Northwestern University, Chicago, IL 60611, USA.
Nicolas H PiguelDepartment of Neuroscience, Northwestern University, Chicago, IL 60611, USA.
Leonardo E DionisioDepartment of Neuroscience, Northwestern University, Chicago, IL 60611, USA.
Alan R SandersCenter for Psychiatric Genetics, NorthShore University HealthSystem, Evanston, IL 60201, USA.
Zhiping P PangDepartment of Neuroscience and Cell Biology, Child Health Institute of New Jersey, Rutgers Robert Wood Johnson Medical School, New Brunswick, NJ 08901, USA.
Xin HeDepartment of Human Genetics, University of Chicago, Chicago, IL 60637, USA.
Peter PenzesDepartment of Neuroscience, Northwestern University, Chicago, IL 60611, USA.
Jubao DuanCenter for Psychiatric Genetics, NorthShore University HealthSystem, Evanston, IL 60201, USA.
Northwestern University · USNorthShore University HealthSystem · USUniversity of Chicago · USRutgers, The State University of New Jersey · US

Funding

Systematic Functional Interpretation of Regulatory Variants in SchizophreniaR01MH106575 · NIMH · ENDEAVOR HEALTH CLINICAL OPERATIONS · PI DUAN, JUBAO · 2016 to 2025
$6.1M
Synaptic and dendritic dysfunction in psychiatric disordersR01MH097216 · NIMH · NORTHWESTERN UNIVERSITY AT CHICAGO · PI PENZES, PETER · 2012 to 2021
$6.1M
Deciphering the neural basis of alcohol use disorders using human and mouse neuronsR01AA023797 · NIAAA · RUTGERS BIOMEDICAL AND HEALTH SCIENCES · PI ZHIPING P. PANG · 2016 to 2026
$4.8M
Modeling Alzheimer's disease genetic variants in hiPSCR01AG063175 · NIA · ENDEAVOR HEALTH CLINICAL OPERATIONS · PI DUAN, JUBAO, THINAKARAN, GOPAL · 2019 to 2023
$3.7M
Integrative Approaches to Understanding Genetic Basis of Neuropsychiatric DiseasesR01MH110531 · NIMH · UNIVERSITY OF CHICAGO · PI HE, XIN · 2017 to 2022
$3.2M
Loss-of-Function Analyses of SETD1A in Human Neural ModelsR01MH125528 · NIMH · RUTGERS BIOMEDICAL AND HEALTH SCIENCES · PI MING, GUO-LI, PANG, ZHIPING P. · 2021 to 2025
$3.2M
Integrating epigenomics with DNA breathing dynamics for human non-coding disease variantsR01MH116281 · NIMH · ENDEAVOR HEALTH CLINICAL OPERATIONS · PI ALEXANDROV, BOIAN STOIANOV, DUAN, JUBAO · 2019 to 2023
$3.0M
Neuronal Vulnerability to Lipid Droplets and Cholesterol in Alzheimer's DiseaseR01AG081374 · NIA · ENDEAVOR HEALTH CLINICAL OPERATIONS · PI Jubao Duan · 2023 to 2026
$2.7M
NIAAA NIH HHS R01 AA023797NIA NIH HHS R01 AG063175NIA NIH HHS R01 AG081374NIMH NIH HHS R01 MH097216NIMH NIH HHS R01 MH106575NIMH NIH HHS R01 MH110531NIMH NIH HHS R01 MH116281NIMH NIH HHS R01 MH125528
6 · The paper itself

Abstract

The mechanistic tie between genome-wide association study (GWAS)-implicated risk variants and disease-relevant cellular phenotypes remains largely unknown. Here, using human induced pluripotent stem cell (hiPSC)-derived neurons as a neurodevelopmental model, we identify multiple schizophrenia (SZ) risk variants that display allele-specific open chromatin (ASoC) and are likely to be functional. Editing the strongest ASoC SNP, rs2027349, near

Indexed as

allele-specific open chromatinchromatin accessibilitycommon risk variantsCRISPR-Cas9 gene editingCROP-seqGWAShuman iPS cellsisogenicMicro-Cneuronneuropsychiatric disordersnoncoding variantsschizophreniascRNA-seqsynergistic

Identifiers

PMID37719141
PMCPMC10504676
OpenAlexW4386226597

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.