Evidence map›Paper›PMID 37715992›Full record

ArticleJournal of experimental botany2024

Characterization of intracellular membrane structures derived from a massive expansion of endoplasmic reticulum (ER) membrane due to synthetic ER-membrane-resident polyproteins.

Andras Sandor, Marketa Samalova, Federica Brandizzi, Verena Kriechbaumer, Ian Moore, Mark D Fricker, Lee J Sweetlove

Open access · hybridAbstract read
In one paragraph

Article in Journal of experimental botany, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
0.3field-weighted citation impact, top 36% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed, 2 citations in OpenAlex.

  1. Article
  2. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 4 institutions in 3 countries.

Andras SandorDepartment of Biology, University of Oxford, South Parks Road, Oxford, UK.ORCID 0000-0002-7148-5880
Marketa SamalovaDepartment of Experimental Biology, Masaryk University, Brno, Czech Republic.ORCID 0000-0002-4373-5053
Federica BrandizziMSU-DOE Plant Research Laboratory, Department of Plant Biology, Michigan State University, East Lansing, Michigan, USA.ORCID 0000-0003-0580-8888
Verena KriechbaumerDepartment of Biological and Medical Sciences, Oxford Brookes University, Oxford, UK.ORCID 0000-0003-3782-5834
Ian MooreDepartment of Biology, University of Oxford, South Parks Road, Oxford, UK.ORCID 0000-0002-1301-1329
Mark D FrickerDepartment of Biology, University of Oxford, South Parks Road, Oxford, UK.ORCID 0000-0002-8942-6897
Lee J SweetloveDepartment of Biology, University of Oxford, South Parks Road, Oxford, UK.ORCID 0000-0002-2461-4133
University of Oxford · GBMasaryk University · CZMichigan State University · USOxford Brookes University · GB

Funding

Unfolded protein response in the model species Arabidopsis thalianaR35GM136637 · NIGMS · MICHIGAN STATE UNIVERSITY · PI Federica Brandizzi · 2020 to 2026
$2.6M
6 · The paper itself

Abstract

The endoplasmic reticulum (ER) is a dynamic organelle that is amenable to major restructuring. Introduction of recombinant ER-membrane-resident proteins that form homo oligomers is a known method of inducing ER proliferation: interaction of the proteins with each other alters the local structure of the ER network, leading to the formation large aggregations of expanded ER, sometimes leading to the formation of organized smooth endoplasmic reticulum (OSER). However, these membrane structures formed by ER proliferation are poorly characterized and this hampers their potential development for plant synthetic biology. Here, we characterize a range of ER-derived membranous compartments in tobacco and show how the nature of the polyproteins introduced into the ER membrane affect the morphology of the final compartment. We show that a cytosol-facing oligomerization domain is an essential component for compartment formation. Using fluorescence recovery after photobleaching, we demonstrate that although the compartment retains a connection to the ER, a diffusional barrier exists to both the ER and the cytosol associated with the compartment. Using quantitative image analysis, we also show that the presence of the compartment does not disrupt the rest of the ER network. Moreover, we demonstrate that it is possible to recruit a heterologous, bacterial enzyme to the compartment, and for the enzyme to accumulate to high levels. Finally, transgenic Arabidopsis constitutively expressing the compartment-forming polyproteins grew and developed normally under standard conditions.

Indexed as

ArabidopsisPolyproteinsEndoplasmic ReticulumIntracellular MembranesMembrane ProteinsMembrane ProteinsPolyproteinsCompartmentendoplasmic reticulummembraneOSERproliferationsynthetic biology

Identifiers

PMID37715992
PMCPMC10735356
OpenAlexW4386799014

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.