Evidence map›Paper›PMID 37714881›Full record

ArticleScientific reports2023

Synthetic OCT-A blood vessel maps using fundus images and generative adversarial networks.

Ivan Coronado, Samiksha Pachade, Emanuele Trucco, Rania Abdelkhaleq, Juntao Yan, Sergio Salazar-Marioni, Amanda Jagolino-Cole, Mozhdeh Bahrainian, Roomasa Channa, Sunil A Sheth and 1 more

Erratum issuedAbstract read
In one paragraph

Article in Scientific reports, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed.

  1. Trial
  2. Prediction of short-term anatomic prognosis for central serous chorioretinopathy using a generative adversarial network.Graefe's archive for clinical and experimental ophthalmology = Albrecht von Graefes Archiv fur klinische und experimentelle Ophthalmologie · 2025
    Article
  3. Review
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

11 authors.

Ivan Coronado *McWilliams School of Biomedical Informatics, University of Texas Health Science Center at Houston, Houston, TX, USA.
Samiksha Pachade *McWilliams School of Biomedical Informatics, University of Texas Health Science Center at Houston, Houston, TX, USA.
Emanuele TruccoVAMPIRE project, School of Science and Engineering (Computing), University of Dundee, Dundee, Scotland, UK.
Rania AbdelkhaleqMcGovern Medical School, University of Texas Health Science Center at Houston, Houston, TX, USA.
Juntao YanMcGovern Medical School, University of Texas Health Science Center at Houston, Houston, TX, USA.
Sergio Salazar-MarioniMcGovern Medical School, University of Texas Health Science Center at Houston, Houston, TX, USA.
Amanda Jagolino-ColeMcGovern Medical School, University of Texas Health Science Center at Houston, Houston, TX, USA.
Mozhdeh BahrainianDepartment of Ophthalmology and Visual Sciences, University of Wisconsin-Madison, Madison, WI, USA.
Roomasa ChannaDepartment of Ophthalmology and Visual Sciences, University of Wisconsin-Madison, Madison, WI, USA.
Sunil A ShethMcGovern Medical School, University of Texas Health Science Center at Houston, Houston, TX, USA.
Luca GiancardoMcWilliams School of Biomedical Informatics, University of Texas Health Science Center at Houston, Houston, TX, USA. luca.giancardo@uth.tmc.edu.

Funding

TRAINING PROGRAM IN COMPUTATIONAL BIOLOGY AND MEDICINET15LM007093 · NLM · RICE UNIVERSITY · PI Lydia E. Kavraki · 1992 to 2026
$20.8M
Genetics of deep-learning-derived neuroimaging endophenotypes for Alzheimer's Disease (Parent grant)U01AG070112 · NIA · UNIVERSITY OF TEXAS HLTH SCI CTR HOUSTON · PI FORNAGE, MYRIAM, JI, SHUIWANG · 2021 to 2025
$7.2M
Deep Learning Enabled Endovascular Stroke Therapy Screening in Community HospitalsR01NS121154 · NINDS · UNIVERSITY OF TEXAS HLTH SCI CTR HOUSTON · PI GIANCARDO, LUCA, SHETH, SUNIL · 2021 to 2025
$2.2M
NIA NIH HHS U01 AG070112NINDS NIH HHS R01 NS121154NLM NIH HHS T15 LM007093
6 · The paper itself

Abstract

Vessel segmentation in fundus images permits understanding retinal diseases and computing image-based biomarkers. However, manual vessel segmentation is a time-consuming process. Optical coherence tomography angiography (OCT-A) allows direct, non-invasive estimation of retinal vessels. Unfortunately, compared to fundus images, OCT-A cameras are more expensive, less portable, and have a reduced field of view. We present an automated strategy relying on generative adversarial networks to create vascular maps from fundus images without training using manual vessel segmentation maps. Further post-processing used for standard en face OCT-A allows obtaining a vessel segmentation map. We compare our approach to state-of-the-art vessel segmentation algorithms trained on manual vessel segmentation maps and vessel segmentations derived from OCT-A. We evaluate them from an automatic vascular segmentation perspective and as vessel density estimators, i.e., the most common imaging biomarker for OCT-A used in studies. Using OCT-A as a training target over manual vessel delineations yields improved vascular maps for the optic disc area and compares to the best-performing vessel segmentation algorithm in the macular region. This technique could reduce the cost and effort incurred when training vessel segmentation algorithms. To incentivize research in this field, we will make the dataset publicly available to the scientific community.

Indexed as

Optic DiskTomography, Optical CoherenceAngiographyFundus OculiRetinal Vessels

Identifiers

PMID37714881
PMCPMC10504307

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.