Evidence map›Paper›PMID 37713393›Full record

ArticlePloS one2023

Computational phenotypes for patients with opioid-related disorders presenting to the emergency department.

R Andrew Taylor, Aidan Gilson, Wade Schulz, Kevin Lopez, Patrick Young, Sameer Pandya, Andreas Coppi, David Chartash, David Fiellin, Gail D'Onofrio

Erratum issuedAbstract read
In one paragraph

Article in PloS one, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed.

  1. Article
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4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

10 authors.

R Andrew TaylorDepartment of Emergency Medicine, Yale School of Medicine, New Haven, Connecticut, United States of America.
Aidan GilsonDepartment of Emergency Medicine, Yale School of Medicine, New Haven, Connecticut, United States of America.ORCID 0000-0002-4770-4705
Wade SchulzSection of Biomedical Informatics and Data Science, Yale School of Medicine, New Haven, Connecticut, United States of America.
Kevin LopezSection of Biomedical Informatics and Data Science, Yale School of Medicine, New Haven, Connecticut, United States of America.
Patrick YoungDepartment of Laboratory Medicine, Yale School of Medicine, New Haven, Connecticut, United States of America.
Sameer PandyaDepartment of Laboratory Medicine, Yale School of Medicine, New Haven, Connecticut, United States of America.
Andreas CoppiDepartment of Internal Medicine, Yale School of Medicine, New Haven, Connecticut, United States of America.
David ChartashDepartment of Biostatistics, Yale School of Public Health, New Haven, Connecticut, United States of America.ORCID 0000-0002-0265-330X
David FiellinDepartment of Internal Medicine, Yale School of Medicine, New Haven, Connecticut, United States of America.
Gail D'OnofrioDepartment of Emergency Medicine, Yale School of Medicine, New Haven, Connecticut, United States of America.

Funding

The National Drug Abuse Treatment Clinical Trials NetworkUG1DA015831 · NIDA · YALE UNIVERSITY · PI Gail D'Onofrio, Roger D. Weiss · 2015 to 2026
$110.8M
Short Term Research Training: Students in Health Professional SchoolsT35DK104689 · NIDDK · YALE UNIVERSITY · PI LLOYD G CANTLEY, Sarwat I Chaudhry · 2015 to 2026
$2.6M
NIDA NIH HHS UG1 DA015831NIDDK NIH HHS T35 DK104689
6 · The paper itself

Abstract

objectiveWe aimed to discover computationally-derived phenotypes of opioid-related patient presentations to the ED via clinical notes and structured electronic health record (EHR) data.

methodsThis was a retrospective study of ED visits from 2013-2020 across ten sites within a regional healthcare network. We derived phenotypes from visits for patients ≥18 years of age with at least one prior or current documentation of an opioid-related diagnosis. Natural language processing was used to extract clinical entities from notes, which were combined with structured data within the EHR to create a set of features. We performed latent dirichlet allocation to identify topics within these features. Groups of patient presentations with similar attributes were identified by cluster analysis.

resultsIn total 82,577 ED visits met inclusion criteria. The 30 topics were discovered ranging from those related to substance use disorder, chronic conditions, mental health, and medical management. Clustering on these topics identified nine unique cohorts with one-year survivals ranging from 84.2-96.8%, rates of one-year ED returns from 9-34%, rates of one-year opioid event 10-17%, rates of medications for opioid use disorder from 17-43%, and a median Carlson comorbidity index of 2-8. Two cohorts of phenotypes were identified related to chronic substance use disorder, or acute overdose.

conclusionsOur results indicate distinct phenotypic clusters with varying patient-oriented outcomes which provide future targets better allocation of resources and therapeutics. This highlights the heterogeneity of the overall population, and the need to develop targeted interventions for each population.

Indexed as

Analgesics, OpioidOpioid-Related DisordersEmergency Service, HospitalHumansPhenotypeRetrospective StudiesAnalgesics, Opioid

Identifiers

PMID37713393
PMCPMC10503758

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.