Evidence map›Paper›PMID 37712426›Full record

ArticleThe Journal of clinical investigation2023

Gut microbes and the liver circadian clock partition glucose and lipid metabolism.

Katya Frazier, Sumeed Manzoor, Katherine Carroll, Orlando DeLeon, Sawako Miyoshi, Jun Miyoshi, Marissa St George, Alan Tan, Evan A Chrisler, Mariko Izumo and 4 more

Open access · goldAbstract read
In one paragraph

Article in The Journal of clinical investigation, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 33 papers, 2 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
33citing papers in PubMed, 2 pooled it
6.3field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

33 citing papers in PubMed, 2 syntheses or guidelines pooled it, 42 citations in OpenAlex.

  1. Pooled it
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  4. Roux-en-Y gastric bypass alters microbial circadian rhythms with links to metabolic improvement.American journal of physiology. Gastrointestinal and liver physiology · 2026
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  6. Association ofGenes · 2026
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

14 authors at 4 institutions in 2 countries.

Katya FrazierDepartment of Medicine and.
Sumeed ManzoorDepartment of Medicine and.
Katherine CarrollDepartment of Medicine and.
Orlando DeLeonDepartment of Medicine and.
Sawako MiyoshiDepartment of General Medicine and.
Jun MiyoshiDepartment of Gastroenterology and Hepatology, Kyorin University School of Medicine, Tokyo, Japan.
Marissa St GeorgeDepartment of Medicine and.
Alan TanDepartment of Medicine and.
Evan A ChrislerDepartment of Animal & Dairy Sciences, University of Wisconsin-Madison, Madison, Wisconsin, USA.
Mariko IzumoDepartment of Neuroscience and.
Joseph S TakahashiDepartment of Neuroscience and.
Mrinalini C RaoDepartment of Medicine and.
Vanessa A LeoneDepartment of Animal & Dairy Sciences, University of Wisconsin-Madison, Madison, Wisconsin, USA.
Eugene B ChangDepartment of Medicine and.
University of Chicago · USUniversity of Wisconsin–Madison · USHoward Hughes Medical Institute · USKyorin University · JP

Funding

MICHIGAN MEDICAL SCIENTIST TRAINING PROGRAMT32GM007863 · NIGMS · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI COLLINS, KATHLEEN L. · 1985 to 2024
$38.3M
ULTRASTRUCTURE AND CYTOMORPHOLOGY COREP30DK042086 · NIDDK · UNIVERSITY OF CHICAGO · PI CHANG, EUGENE B · 1990 to 2025
$29.8M
Pilot and Feasibility ProgramP30DK020595 · NIDDK · UNIVERSITY OF CHICAGO · PI RONALD N COHEN · 2013 to 2026
$20.9M
Research Training in Digestive Health, Diseases, and NutritionT32DK007074 · NIDDK · UNIVERSITY OF CHICAGO · PI EUGENE B CHANG · 1986 to 2026
$11.3M
Conceptual and mechanistic insights into the development of diet-induced obesity through disruption of hepatic circadian rhythms by the gut microbiomeR01DK115221 · NIDDK · UNIVERSITY OF CHICAGO · PI CHANG, EUGENE B · 2019 to 2022
$2.4M
Probing short and long term consequences of Small and Large Bowel Microbiota Transplants on Host Physiology: Implications for the development of future live biotherapeuticsR01DK138072 · NIDDK · UNIVERSITY OF CHICAGO · PI EUGENE B CHANG, Kristina Brooke Martinez-Guryn · 2024 to 2026
$2.1M
Diurnal Oscillations in Gut Microbes and Host Immunity in Health and ObesityK01DK111785 · NIDDK · UNIVERSITY OF WISCONSIN-MADISON · PI LEONE, VANESSA ANNE · 2017 to 2021
$723k
The role of the peripheral liver circadian clock and diurnal gut microbial mediators in the regulation of hepatic gluconeogenesisF31DK122714 · NIDDK · UNIVERSITY OF CHICAGO · PI FRAZIER, KATYA MORGAN · 2019 to 2021
$137k
NIDDK NIH HHS F31 DK122714NIDDK NIH HHS K01 DK111785NIDDK NIH HHS P30 DK020595NIDDK NIH HHS P30 DK042086NIDDK NIH HHS R01 DK115221NIDDK NIH HHS R01 DK138072NIDDK NIH HHS T32 DK007074NIGMS NIH HHS T32 GM007863
6 · The paper itself

Abstract

Circadian rhythms govern glucose homeostasis, and their dysregulation leads to complex metabolic diseases. Gut microbes exhibit diurnal rhythms that influence host circadian networks and metabolic processes, yet underlying mechanisms remain elusive. Here, we showed hierarchical, bidirectional communication among the liver circadian clock, gut microbes, and glucose homeostasis in mice. To assess this relationship, we utilized mice with liver-specific deletion of the core circadian clock gene Bmal1 via Albumin-cre maintained in either conventional or germ-free housing conditions. The liver clock, but not the forebrain clock, required gut microbes to drive glucose clearance and gluconeogenesis. Liver clock dysfunctionality expanded proportions and abundances of oscillating microbial features by 2-fold relative to that in controls. The liver clock was the primary driver of differential and rhythmic hepatic expression of glucose and fatty acid metabolic pathways. Absent the liver clock, gut microbes provided secondary cues that dampened these rhythms, resulting in reduced lipid fuel utilization relative to carbohydrates. All together, the liver clock transduced signals from gut microbes that were necessary for regulating glucose and lipid metabolism and meeting energy demands over 24 hours.

Indexed as

Circadian ClocksGastrointestinal MicrobiomeAnimalsGlucoseLipid MetabolismLiverMiceGlucoseFatty acid oxidationGluconeogenesisMetabolismMouse models

Identifiers

PMID37712426
PMCPMC10503806
OpenAlexW4386737079

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.