Evidence map›Paper›PMID 37711378›Full record

ArticleRSC advances2023

Novel pyrene-calix[4]arene derivatives as highly sensitive sensors for nucleotides, DNA and RNA.

Ivana Nikšić-Franjić, Benoit Colasson, Olivia Reinaud, Aleksandar Višnjevac, Ivo Piantanida, Dijana Pavlović Saftić

Abstract read
In one paragraph

Article in RSC advances, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Ivana Nikšić-FranjićDivision of Physical Chemistry, Laboratory for Chemical and Biological Crystallography, Ruđer Bošković Institute Bijenička cesta 54 10000 Zagreb Croatia aleksandar.visnjevac@irb.hr.
Benoit ColassonUniversité de Paris - Laboratoire de Chimie et Biochimie Pharmacologiques et Toxicologiques, CNRS UMR 8601 45 rue des Saints Pères 75006 Paris France.
Olivia ReinaudUniversité de Paris - Laboratoire de Chimie et Biochimie Pharmacologiques et Toxicologiques, CNRS UMR 8601 45 rue des Saints Pères 75006 Paris France.
Aleksandar VišnjevacDivision of Physical Chemistry, Laboratory for Chemical and Biological Crystallography, Ruđer Bošković Institute Bijenička cesta 54 10000 Zagreb Croatia aleksandar.visnjevac@irb.hr.ORCID https://orcid.org/0000-0002-4382-6908
Ivo PiantanidaDivision of Organic Chemistry and Biochemistry, Laboratory for Biomolecular Interactions and Spectroscopy, Ruđer Bošković Institute Bijenička cesta 54 10000 Zagreb Croatia dijana.pavlovic.saftic@irb.hr.
Dijana Pavlović SaftićDivision of Organic Chemistry and Biochemistry, Laboratory for Biomolecular Interactions and Spectroscopy, Ruđer Bošković Institute Bijenička cesta 54 10000 Zagreb Croatia dijana.pavlovic.saftic@irb.hr.ORCID https://orcid.org/0000-0002-0657-1635

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Covalent functionalization of a calix[4]arene with one or two pyrene arms at one rim and two imidazoles at the opposite rim of the macrocyclic basket, yields fluorescent conjugates characterized by intramolecular pyrene-calixarene exciplex emission of a mono-pyrene conjugate, whereas the bis-pyrene derivative exhibits pyrene excimer fluorescence. The pyrene emission in these novel compounds is shown to be sensitive to non-covalent interactions with both mono- and polynucleotides. Pyrene-calixarene conjugates, acting as host molecules, strongly interact with nucleotides, as monitored by moderate emission quenching, reaching 0.1 μM affinities, comparable to some of the most effective supramolecular sensors for nucleotides. These compounds are efficiently inserted into ds-DNA/RNA grooves, with a high, 0.1-1 μM affinity, not influencing significantly any of the ds-polynucleotide native properties, whereby complete emission quenching allows the detection of DNA at nM concentration.

Identifiers

PMID37711378
PMCPMC10498358

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.