Evidence map›Paper›PMID 37709848›Full record

SynthesisScientific reports2023

Effects of oxygen availability on mycobenthic communities of marine coastal sediments.

Yanyan Yang, Carmen Alicia Rivera Pérez, Tim Richter-Heitmann, Rolf Nimzyk, Michael W Friedrich, Marlis Reich

Open access · goldAbstract readMeta-Analysis
In one paragraph

Synthesis in Scientific reports, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
1.0field-weighted citation impact, top 23% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 4 citations in OpenAlex.

  1. Environmental Adaptation Strategies of Deep-Sea Fungi.Journal of fungi (Basel, Switzerland) · 2026
    Review
  2. Article
  3. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 1 country.

Yanyan YangMolecular Ecology Group, Faculty of Biology and Chemistry, University of Bremen, Bremen, Germany.
Carmen Alicia Rivera PérezMolecular Ecology Group, Faculty of Biology and Chemistry, University of Bremen, Bremen, Germany.
Tim Richter-HeitmannMicrobial Ecophysiology Group, Faculty of Biology and Chemistry, University of Bremen, Bremen, Germany.
Rolf NimzykMicrobial Ecophysiology Group, Faculty of Biology and Chemistry, University of Bremen, Bremen, Germany.
Michael W FriedrichMicrobial Ecophysiology Group, Faculty of Biology and Chemistry, University of Bremen, Bremen, Germany.
Marlis ReichMolecular Ecology Group, Faculty of Biology and Chemistry, University of Bremen, Bremen, Germany. reich@uni-bremen.de.
University of Bremen · DECarl von Ossietzky Universität Oldenburg · DE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

In coastal marine sediments, oxygen availability varies greatly, and anoxic conditions can develop quickly over low spatial resolution. Although benthic fungi are important players in the marine carbon cycle, little is known about their adaptation to fluctuating availability of oxygen as terminal electron acceptor. Here, we study which part of a mycobenthic community from oxic coastal sediments can thrive under temporarily anoxic conditions. We test whether phylogeny or certain fungal traits promote plasticity in respect to changes in oxygen availability. Therefore, we incubated mycobenthos under oxic and anoxic conditions, performed ITS2 Illumina tag-sequencing and an additional meta-analysis on a literature survey. Half of all OTUs showed a plasticity towards changing oxygen availability and exhibited different strategies towards anoxic conditions, with rapid response within hours or a delayed one after several days. The strategy of dimorphism and facultative yeasts were significantly linked to OTU occurrence in anoxic conditions, while phylogeny and other traits had less effect. Our results suggest that different fungal niches are formed over the duration of prolonged anoxic conditions. The taxon-specific proliferation seems to be regulated by the fine-tuning of various traits and factors. It is essential to take these results into account when conducting conceptual work on the functionality of the marine benthos.

Indexed as

HypoxiaOxygenCarbon CycleHigh-Throughput Nucleotide SequencingHumansOxidantsOxidantsOxygen

Identifiers

PMID37709848
PMCPMC10502103
OpenAlexW4386745418

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.