Evidence map›Paper›PMID 37706193›Full record

ArticleProceedings. IEEE International Symposium on Biomedical Imaging2023

Foveal avascular zone segmentation using deep learning-driven image-level optimization and fundus photographs.

I Coronado, S Pachade, H Dawoodally, S Salazar Marioni, J Yan, R Abdelkhaleq, M Bahrainian, A Jagolino-Cole, R Channa, S A Sheth and 1 more

Abstract read
In one paragraph

Article in Proceedings. IEEE International Symposium on Biomedical Imaging, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

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0citing papers in PubMed
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1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

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5 · Who and what money

Authors and funding

11 authors.

I CoronadoCenter for Precision Health, School of Biomedical Informatics, University of Texas Health Science Center at Houston (UTHealth), TX, USA.
S PachadeCenter for Precision Health, School of Biomedical Informatics, University of Texas Health Science Center at Houston (UTHealth), TX, USA.
H DawoodallyCenter for Precision Health, School of Biomedical Informatics, University of Texas Health Science Center at Houston (UTHealth), TX, USA.
S Salazar MarioniMcGovern Medical School, UTHealth, Houston, TX, USA.
J YanCenter for Precision Health, School of Biomedical Informatics, University of Texas Health Science Center at Houston (UTHealth), TX, USA.
R AbdelkhaleqMcGovern Medical School, UTHealth, Houston, TX, USA.
M BahrainianDepartment of Ophthalmology and Visual Sciences, University of Wisconsin-Madison, WI, USA.
A Jagolino-ColeMcGovern Medical School, UTHealth, Houston, TX, USA.
R ChannaDepartment of Ophthalmology and Visual Sciences, University of Wisconsin-Madison, WI, USA.
S A ShethMcGovern Medical School, UTHealth, Houston, TX, USA.
L GiancardoCenter for Precision Health, School of Biomedical Informatics, University of Texas Health Science Center at Houston (UTHealth), TX, USA.

Funding

TRAINING PROGRAM IN COMPUTATIONAL BIOLOGY AND MEDICINET15LM007093 · NLM · RICE UNIVERSITY · PI Lydia E. Kavraki · 1992 to 2026
$20.8M
Deep Learning Enabled Endovascular Stroke Therapy Screening in Community HospitalsR01NS121154 · NINDS · UNIVERSITY OF TEXAS HLTH SCI CTR HOUSTON · PI GIANCARDO, LUCA, SHETH, SUNIL · 2021 to 2025
$2.2M
NINDS NIH HHS R01 NS121154NLM NIH HHS T15 LM007093
6 · The paper itself

Abstract

The foveal avascular zone (FAZ) is a retinal area devoid of capillaries and associated with multiple retinal pathologies and visual acuity. Optical Coherence Tomography Angiography (OCT-A) is a very effective means of visualizing retinal vascular and avascular areas, but its use remains limited to research settings due to its complex optics limiting availability. On the other hand, fundus photography is widely available and often adopted in population studies. In this work, we test the feasibility of estimating the FAZ from fundus photos using three different approaches. The first two approaches rely on pixel-level and image-level FAZ information to segment FAZ pixels and regress FAZ area, respectively. The third is a training mask-free pipeline combining saliency maps with an active contours approach to segment FAZ pixels while being trained on image-level measures of the FAZ areas. This enables training FAZ segmentation methods without manual alignment of fundus and OCT-A images, a time-consuming process, which limits the dataset that can be used for training. Segmentation methods trained on pixel-level labels and image-level labels had good agreement with masks from a human grader (respectively DICE of 0.45 and 0.4). Results indicate the feasibility of using fundus images as a proxy to estimate the FAZ when angiography data is not available.

Indexed as

active contoursconvolutional neural networksdeep learningfoveal avascular zonefundus photos

Identifiers

PMID37706193
PMCPMC10498664

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.