Evidence map›Paper›PMID 37705656›Full record

ArticlePeerJ. Computer science2023

PyMC: a modern, and comprehensive probabilistic programming framework in Python.

Oriol Abril-Pla, Virgile Andreani, Colin Carroll, Larry Dong, Christopher J Fonnesbeck, Maxim Kochurov, Ravin Kumar, Junpeng Lao, Christian C Luhmann, Osvaldo A Martin and 4 more

Abstract read
In one paragraph

Article in PeerJ. Computer science, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 505 papers.

0numbers the graph read from it
0cells of the map it votes in
505citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

505 citing papers in PubMed.

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  15. Continuity in geometric intuition between humans and monkeys.Proceedings of the National Academy of Sciences of the United States of America · 2026
    Article
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445 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

14 authors.

Oriol Abril-PlaArviZ-Devs, Barcelona, Spain.ORCID 0000-0002-1847-9481
Virgile AndreaniBiomedical Engineering Department, Boston University, Boston, United States of America.ORCID 0000-0002-2383-1478
Colin CarrollGoogle, Cambridge, MA, United States of America.
Larry DongDalla Lana School of Public Health, University of Toronto, Toronto, Canada.
Christopher J FonnesbeckBaseball Operations Research and Development, Philadelphia Phillies, Philadelphia, United States of America.
Maxim KochurovPyMC Labs, Berlin, Germany.
Ravin KumarGoogle, Mountain View, CA, United States of America.
Junpeng LaoGoogle, Zürich, Switzerland.ORCID 0000-0001-6029-7510
Christian C LuhmannDepartment of Psychology, Stony Brook University, Stony Brook, United States of America.
Osvaldo A MartinIMASL-CONICET, Universidad Nacional de San Luis, San Luis, Argentina.ORCID 0000-0001-7419-8978
Michael OsthegeForschungszentrum Jülich GmbH, Jülich, Germany.
Ricardo VieiraPyMC Labs, Berlin, Germany.
Thomas WieckiPyMC Labs, Berlin, Germany.
Robert ZinkovOxford University, Oxford, United Kingdom.ORCID 0000-0002-8654-2235

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

PyMC is a probabilistic programming library for Python that provides tools for constructing and fitting Bayesian models. It offers an intuitive, readable syntax that is close to the natural syntax statisticians use to describe models. PyMC leverages the symbolic computation library PyTensor, allowing it to be compiled into a variety of computational backends, such as C, JAX, and Numba, which in turn offer access to different computational architectures including CPU, GPU, and TPU. Being a general modeling framework, PyMC supports a variety of models including generalized hierarchical linear regression and classification, time series, ordinary differential equations (ODEs), and non-parametric models such as Gaussian processes (GPs). We demonstrate PyMC's versatility and ease of use with examples spanning a range of common statistical models. Additionally, we discuss the positive role of PyMC in the development of the open-source ecosystem for probabilistic programming.

Indexed as

Bayesian statisticsMarkov chain Monte CarloProbabilistic programmingPythonStatistical modeling

Identifiers

PMID37705656
PMCPMC10495961

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.