Evidence map›Paper›PMID 37702404›Full record

ArticleBiochemistry and molecular biology education : a bimonthly publication of the International Union of Biochemistry and Molecular Biology

CUR(E)ating a new approach to study fungal effectors and enhance undergraduate education through authentic research.

Gengtan Li, Mai McWilliams, Matheus Rodrigues, Benjamin Mearkle, Nader Jaafar, Vivek Golla, Houlin Yu, He Yang, Dilay Hazal Ayhan, Kelly Allen and 3 more

Open access · hybridAbstract read
In one paragraph

Article in Biochemistry and molecular biology education : a bimonthly publication of the International Union of Biochemistry and Molecular Biology. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
0.2field-weighted citation impact, top 41% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed, 1 citations in OpenAlex.

  1. A CURE for Microbiology Experiment: Isolation and Characterization of Antimicrobial-Producing Lactic Acid Bacteria From Fermented Sichuan Pickle Against Pathogenic Bacteria.Biochemistry and molecular biology education : a bimonthly publication of the International Union of Biochemistry and Molecular Biology
    Article
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

13 authors at 1 institution in 1 country.

Gengtan LiBiochemistry and Molecular Biology, University of Massachusetts Amherst, Amherst, Massachusetts, USA.
Mai McWilliamsBiochemistry and Molecular Biology, University of Massachusetts Amherst, Amherst, Massachusetts, USA.
Matheus RodriguesBiochemistry and Molecular Biology, University of Massachusetts Amherst, Amherst, Massachusetts, USA.
Benjamin MearkleBiochemistry and Molecular Biology, University of Massachusetts Amherst, Amherst, Massachusetts, USA.
Nader JaafarBiochemistry and Molecular Biology, University of Massachusetts Amherst, Amherst, Massachusetts, USA.
Vivek GollaBiochemistry and Molecular Biology, University of Massachusetts Amherst, Amherst, Massachusetts, USA.
Houlin YuBiochemistry and Molecular Biology, University of Massachusetts Amherst, Amherst, Massachusetts, USA.
He YangBiochemistry and Molecular Biology, University of Massachusetts Amherst, Amherst, Massachusetts, USA.
Dilay Hazal AyhanBiochemistry and Molecular Biology, University of Massachusetts Amherst, Amherst, Massachusetts, USA.
Kelly AllenBiochemistry and Molecular Biology, University of Massachusetts Amherst, Amherst, Massachusetts, USA.
Domingo Martínez-SotoBiochemistry and Molecular Biology, University of Massachusetts Amherst, Amherst, Massachusetts, USA.
Amy SpringerBiochemistry and Molecular Biology, University of Massachusetts Amherst, Amherst, Massachusetts, USA.
Li-Jun MaBiochemistry and Molecular Biology, University of Massachusetts Amherst, Amherst, Massachusetts, USA.ORCID 0000-0002-2733-3708
Amherst College · US

Funding

Identify virulence factors that facilitate Fusarium keratitisR01EY030150 · NEI · UNIVERSITY OF MASSACHUSETTS AMHERST · PI MA, LI-JUN · 2019 to 2023
$1.9M
NEI NIH HHS R01 EY030150NIH HHS R01EY030150
6 · The paper itself

Abstract

Course-based Undergraduate Research Experiences (CUREs) integrate active, discovery-based learning into undergraduate curricula, adding tremendous value to Biochemistry and Molecular Biology (BMB) education. There are multiple challenges in transforming a research project into a CURE, such as the readiness of students, the time commitment of the instructor, and the productivity of the research. In this article, we report a CURE course developed and offered in the University of Massachusetts Amherst BMB Department since 2018 that addresses these challenges. Our CURE focuses on fungal effectors which are proteins secreted by a destructive pathogenic fungus Fusarium oxysporum, one of the top five most devastating plant pathogens. By studying this group of proteins, students are connected to real-world problems and participate in the search for potential solutions. A 3-week "standard Boot Camp" is implemented to help students familiarize themselves with all basic techniques and boost their confidence. Next, molecular cloning, a versatile technique with modularity and repeatability, is used as the bedrock of the course. Our past 5 years of experience have confirmed that we have developed a novel and feasible CURE protocol. Measurable progress documented by students who took this course includes stimulated active learning and increased career trajectory to pursue hypothesis-based research to address societal needs. In addition, data generated through the course advance ongoing lab research. Collectively, we encourage the implementation of CURE among research-intensive faculty to provide a more inclusive research experience to undergraduate students, an important element in predicting career success.

Indexed as

BiochemistryStudentsCurriculumHumansProblem-Based LearningProteinsProteinsauthentic researchBMB undergraduate educationcourse-based undergraduate research experience (CURE)knowledge discoveryproblem-solving

Identifiers

PMID37702404
PMCPMC10843451
OpenAlexW4386704434

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.