Evidence map›Paper›PMID 37702381›Full record

ArticleJournal of veterinary internal medicine

Microbiome analysis of bile from apparently healthy cats and cats with suspected hepatobiliary disease.

Tanner S Slead, Benjamin J Callahan, Megan E Schreeg, Gabriela S Seiler, Devorah M Stowe, Maria Andrea Azcarate-Peril, Megan E Jacob, Jody L Gookin

Open access · goldAbstract read
In one paragraph

Article in Journal of veterinary internal medicine. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
1.3field-weighted citation impact, top 18% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed, 5 citations in OpenAlex.

  1. Article
  2. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 2 institutions in 1 country.

Tanner S SleadDepartment of Clinical Sciences, North Carolina State University, Raleigh, North Carolina, USA.ORCID https://orcid.org/0000-0001-8645-0085
Benjamin J CallahanDepartment of Population Health and Pathobiology, North Carolina State University, Raleigh, North Carolina, USA.ORCID https://orcid.org/0000-0002-8752-117X
Megan E SchreegDepartment of Population Health and Pathobiology, North Carolina State University, Raleigh, North Carolina, USA.ORCID https://orcid.org/0000-0001-5649-8854
Gabriela S SeilerDepartment of Molecular Biomedical Sciences, North Carolina State University, Raleigh, North Carolina, USA.ORCID https://orcid.org/0000-0003-0643-8436
Devorah M StoweDepartment of Population Health and Pathobiology, North Carolina State University, Raleigh, North Carolina, USA.ORCID https://orcid.org/0000-0002-4058-2995
Maria Andrea Azcarate-PerilDepartment of Plant and Microbial Biology, University of North Carolina at Chapel Hill, Chapel Hill, North Carolina, USA.ORCID https://orcid.org/0000-0003-0325-1289
Megan E JacobDepartment of Population Health and Pathobiology, North Carolina State University, Raleigh, North Carolina, USA.ORCID https://orcid.org/0000-0002-6719-4044
Jody L GookinDepartment of Clinical Sciences, North Carolina State University, Raleigh, North Carolina, USA.ORCID https://orcid.org/0000-0002-2911-0874
North Carolina State University · USUniversity of North Carolina at Chapel Hill · US

Funding

UNIV OF NORTH CAROLINA CLINICAL NUTRITION RESEARCH UNITP30DK056350 · NIDDK · UNIV OF NORTH CAROLINA CHAPEL HILL · PI Ian Michael Carroll · 1999 to 2026
$31.6M
PILOT AND FEASIBILITY STUDIESP30DK034987 · NIDDK · UNIV OF NORTH CAROLINA CHAPEL HILL · PI ANTHONY BLIKSLAGER · 1985 to 2026
$30.5M
Quantitative Metagenomics and the Vaginal Microbiome of Preterm BirthR35GM133745 · NIGMS · NORTH CAROLINA STATE UNIVERSITY RALEIGH · PI Benjamin John Callahan · 2019 to 2026
$2.3M
NIDDK NIH HHS P30 DK034987NIDDK NIH HHS P30 DK056350NIGMS NIH HHS R35 GM133745
6 · The paper itself

Abstract

backgroundBacterial infection of bile is a common cause of hepatobiliary disease in cats. Whether bile harbors a core microbiota in health or in cases of suspected hepatobiliary disease in cats is unknown.

objectivesEstablish if gallbladder bile in apparently healthy cats harbors a core microbiota composed of bacterial taxa common to many individuals. Compare results of bile cytology, bile culture, and 16S rRNA gene amplicon sequencing in apparently healthy cats and cats with suspected hepatobiliary disease. ANIMALS: Forty-three client-owned cats with suspected hepatobiliary disease and 17 control cats.

methodsBile was collected by ultrasound guided cholecystocentesis (cats with suspected hepatobiliary disease) or laparotomy after euthanasia (controls). Bile samples underwent cytologic examination, aerobic and anaerobic culture, and DNA was extracted for 16S rRNA gene amplification and sequencing.

resultsMicrobiome sequencing did not identify a core microbiota in control cats or cats having bile sampled because of clinical suspicion for hepatobiliary disease. Microbiome profiles from control cats were indistinguishable from profiles obtained from sampling instruments and reagents that were not exposed to bile (technical controls). Bacterial taxa that could not be explained by contamination or off-target amplification were identified only in samples from cats with bactibilia and positive bile culture results for Escherichia coli. In several E. coli positive samples, microbiome sequencing also identified a small number of potentially co-infecting bacterial genera not identified by culture. CONCLUSIONS AND CLINICAL IMPORTANCE: Cat bile does not harbor a core microbiota. Uncultured bacteria may contribute to pathogenesis of hepatobiliary disease in cats with bile E. coli infection.

Indexed as

Cat DiseasesDigestive System DiseasesEscherichia coli InfectionsMicrobiotaAnimalsBileCatsEscherichia coliHumansRNA, Ribosomal, 16SRNA, Ribosomal, 16Scholangitisfelinegallbladdermicrobiota

Identifiers

PMID37702381
PMCPMC10658561
OpenAlexW4386705430

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.