Evidence map›Paper›PMID 37699896›Full record

ArticleNature communications2023

The genomic footprint of whaling and isolation in fin whale populations.

Sergio F Nigenda-Morales, Meixi Lin, Paulina G Nuñez-Valencia, Christopher C Kyriazis, Annabel C Beichman, Jacqueline A Robinson, Aaron P Ragsdale, Jorge Urbán R, Frederick I Archer, Lorena Viloria-Gómora and 5 more

Abstract read
In one paragraph

Article in Nature communications, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 24 papers.

0numbers the graph read from it
0cells of the map it votes in
24citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

24 citing papers in PubMed.

  1. Review
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  13. The genome sequence of the fin whale,Wellcome open research · 2026
    Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

15 authors.

Sergio F Nigenda-Morales *Advanced Genomics Unit, National Laboratory of Genomics for Biodiversity (Langebio), Center for Research and Advanced Studies (Cinvestav), Irapuato, Guanajuato, 36824, Mexico. snigenda@csusm.edu.ORCID http://orcid.org/0000-0002-2301-6975
Meixi Lin *Department of Ecology and Evolutionary Biology, University of California, Los Angeles, Los Angeles, CA, 90095, USA. meixilin@ucla.edu.ORCID http://orcid.org/0000-0001-5233-0675
Paulina G Nuñez-ValenciaAdvanced Genomics Unit, National Laboratory of Genomics for Biodiversity (Langebio), Center for Research and Advanced Studies (Cinvestav), Irapuato, Guanajuato, 36824, Mexico.ORCID http://orcid.org/0000-0002-9742-5376
Christopher C KyriazisDepartment of Ecology and Evolutionary Biology, University of California, Los Angeles, Los Angeles, CA, 90095, USA.
Annabel C BeichmanDepartment of Genome Sciences, University of Washington, Seattle, WA, 98195, USA.ORCID http://orcid.org/0000-0002-6991-587X
Jacqueline A RobinsonInstitute for Human Genetics, University of California, San Francisco (UCSF), San Francisco, CA, 94143, USA.ORCID http://orcid.org/0000-0002-5556-815X
Aaron P RagsdaleAdvanced Genomics Unit, National Laboratory of Genomics for Biodiversity (Langebio), Center for Research and Advanced Studies (Cinvestav), Irapuato, Guanajuato, 36824, Mexico.
Jorge Urbán RDepartamento de Ciencias Marinas y Costeras, Universidad Autónoma de Baja California Sur (UABCS), La Paz, Baja California Sur, Mexico.ORCID http://orcid.org/0000-0003-1423-8573
Frederick I ArcherMarine Mammal and Turtle Division, Southwest Fisheries Science Center, La Jolla, CA, 92037, USA.ORCID http://orcid.org/0000-0002-3179-4769
Lorena Viloria-GómoraDepartamento de Ciencias Marinas y Costeras, Universidad Autónoma de Baja California Sur (UABCS), La Paz, Baja California Sur, Mexico.
María José Pérez-ÁlvarezEscuela de Medicina Veterinaria, Facultad de Medicina y Ciencias de la Salud, Universidad Mayor, Santiago, Chile.ORCID http://orcid.org/0000-0003-1440-8966
Elie PoulinMillennium Institute Biodiversity of Antarctic and Subantarctic Ecosystems (BASE), Universidad de Chile, Santiago, Chile.ORCID http://orcid.org/0000-0001-7736-0969
Kirk E LohmuellerDepartment of Ecology and Evolutionary Biology, University of California, Los Angeles, Los Angeles, CA, 90095, USA. klohmueller@g.ucla.edu.
Andrés Moreno-EstradaAdvanced Genomics Unit, National Laboratory of Genomics for Biodiversity (Langebio), Center for Research and Advanced Studies (Cinvestav), Irapuato, Guanajuato, 36824, Mexico. andres.moreno@cinvestav.mx.ORCID http://orcid.org/0000-0001-8329-8292
Robert K WayneDepartment of Ecology and Evolutionary Biology, University of California, Los Angeles, Los Angeles, CA, 90095, USA.

Funding

Biological Mechanisms of Healthy Aging Training GrantT32AG066574 · NIA · UNIVERSITY OF WASHINGTON · PI David J. Marcinek, Jessica E Young · 2020 to 2026
$5.3M
Population genomics of the selective effects of new mutationsR35GM119856 · NIGMS · UNIVERSITY OF CALIFORNIA LOS ANGELES · PI LOHMUELLER, KIRK · 2016 to 2025
$3.4M
NIA NIH HHS T32 AG066574NIGMS NIH HHS R35 GM119856
6 · The paper itself

Abstract

Twentieth century industrial whaling pushed several species to the brink of extinction, with fin whales being the most impacted. However, a small, resident population in the Gulf of California was not targeted by whaling. Here, we analyzed 50 whole-genomes from the Eastern North Pacific (ENP) and Gulf of California (GOC) fin whale populations to investigate their demographic history and the genomic effects of natural and human-induced bottlenecks. We show that the two populations diverged ~16,000 years ago, after which the ENP population expanded and then suffered a 99% reduction in effective size during the whaling period. In contrast, the GOC population remained small and isolated, receiving less than one migrant per generation. However, this low level of migration has been crucial for maintaining its viability. Our study exposes the severity of whaling, emphasizes the importance of migration, and demonstrates the use of genome-based analyses and simulations to inform conservation strategies.

Indexed as

Fin WhaleAnimalsGenomicsHumansIndustry

Identifiers

PMID37699896
PMCPMC10497599

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.