Evidence map›Paper›PMID 37699513›Full record

ArticleBiochemistry2023

Characterization of a FourU RNA Thermometer in the 5' Untranslated Region of Autolysin Gene

Alina Y Tong, Emma E Caudill, Alexis R Jones, Luiz F M Passalacqua, Michael M Abdelsayed

Abstract read
PubMed Full text at PMC Publisher
In one paragraph

Article in Biochemistry, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

  1. Article
  2. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

Alina Y TongDepartment of Biology, California Lutheran University, Thousand Oaks, California 91360, United States.ORCID 0009-0008-4029-7976
Emma E CaudillDepartment of Biology, California Lutheran University, Thousand Oaks, California 91360, United States.
Alexis R JonesDepartment of Biology, California Lutheran University, Thousand Oaks, California 91360, United States.
Luiz F M PassalacquaLaboratory of Nucleic Acids, National Heart, Lung, and Blood Institute, National Institutes of Health, Bethesda, Maryland 20892, United States.
Michael M AbdelsayedDepartment of Biology, California Lutheran University, Thousand Oaks, California 91360, United States.ORCID 0000-0002-9622-832X

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

RNA thermometers are noncoding RNA structures located in the 5' untranslated regions (UTRs) of genes that regulate gene expression through temperature-dependent conformational changes. The fourU class of RNA thermometers contains a specific motif in which four consecutive uracil nucleotides are predicted to base pair with the Shine-Dalgarno (SD) sequence in a stem. We employed a bioinformatic search to discover a fourU RNA thermometer in the 5'-UTR of the

Indexed as

Bacillus PhagesBacillus subtilis5' Untranslated RegionsN-Acetylmuramoyl-L-alanine AmidaseProphages5' Untranslated RegionsN-Acetylmuramoyl-L-alanine Amidase

Identifiers

PMID37699513
PMCPMC10586365

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.