Evidence map›Paper›PMID 37697240›Full record

ArticleBMC cancer2023

Integrated profiling identifies CACNG3 as a prognostic biomarker for patients with glioma.

Enfang Shan, Yi-Nan Cao, Yang Zhang, Wen Chen, Xurui Ren, Shanjie Zhu, Xueru Xi, Shuai Mu, Mian Ma, Tongle Zhi and 1 more

Open access · goldAbstract read
In one paragraph

Article in BMC cancer, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
1.4field-weighted citation impact, top 17% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 5 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 4 institutions in 1 country.

Enfang Shan *School of Nursing, Nanjing Medical University, No.140 Hanzhong Road, Nanjing, Jiangsu Province, 210000, China.
Yi-Nan Cao *School of Nursing, Nanjing Medical University, No.140 Hanzhong Road, Nanjing, Jiangsu Province, 210000, China.
Yang ZhangSchool of Nursing, Nanjing Medical University, No.140 Hanzhong Road, Nanjing, Jiangsu Province, 210000, China.
Wen ChenSchool of Nursing, Nanjing Medical University, No.140 Hanzhong Road, Nanjing, Jiangsu Province, 210000, China.
Xurui RenSchool of Nursing, Nanjing Medical University, No.140 Hanzhong Road, Nanjing, Jiangsu Province, 210000, China.
Shanjie ZhuSchool of Nursing, Nanjing Medical University, No.140 Hanzhong Road, Nanjing, Jiangsu Province, 210000, China.
Xueru XiSchool of Nursing, Nanjing Medical University, No.140 Hanzhong Road, Nanjing, Jiangsu Province, 210000, China.
Shuai MuDepartment of Oncology, Senior Department of Oncology, The First Medical Center of Chinese People's Liberation Army (PLA) General Hospital, Beijing, 100039, China.
Mian MaDepartment of Neurosurgery, Suzhou Municipal Hospital, Gusu School, The Affiliated Suzhou Hospital of Nanjing Medical University, Nanjing Medical University, No.242 Guangji road, Suzhou, Jiangsu Province, 215008, China.
Tongle ZhiThe First People's Hospital of Yancheng, The Fourth Affiliated Hospital of Nantong University, Yancheng, Jiangsu Province, 224006, China. zhitongle1985@126.com.
Xianwen LiSchool of Nursing, Nanjing Medical University, No.140 Hanzhong Road, Nanjing, Jiangsu Province, 210000, China. xwli0201@njmu.edu.cn.
Nanjing Medical University · CNChinese People's Liberation Army · CNNanjing Xiaozhuang University · CNYancheng First People's Hospital · CN

Funding

Jiangsu Commission of Health Nos. Z2020028Jiangsu Commission of Health Z2021034the Key Discipline Program of Jiangsu Province [2016, No.09]
6 · The paper itself

Abstract

Gliomas are the most common malignant primary brain tumors in adults with poor prognoses. The purpose of this study is to explore CACNG3 as a prognostic factor that is closely related to the progression and survival outcome of gliomas and to provide a potential new molecular target for the diagnosis and treatment of glioma patients. CACNG3 expression and related clinical data were collected from three major databases of The Chinese Glioma Genome Atlas (CGGA), The Cancer Genome Atlas (TCGA), and Gene Expression Omnibus (GEO). The CGGA dataset was used as a training set, and TCGA and GEO datasets obtained from the GEO database were used for validation. CACNG3 was expressed at low levels in the tumor group, and the overall survival (OS) in patients with low CACNG3 expression is shorter. Furthermore, CACNG3 expression was negatively associated with glioma grades, which was confirmed in the IHC results of clinical samples. The expression level of CACNG3 in the IDH1 wide-type group, 1p/19q non-codel group, and mesenchymal subtype group was significantly reduced, and the results showed that CACNG3 could serve as a biomarker for the mesenchymal molecular subtype. In addition, the univariate and multivariate analysis verified the prognostic value of CACNG3 in predicting the OS of gliomas of all grades. The results of functional annotation and pathway enrichment analysis of differently expressed genes(DEGs), showed that CACNG3 might affect the development of glioma by interfering with synaptic transmission. Moreover, temozolomide (TMZ), commonly used in the treatment of glioma, increased CACNG3 expression in a dose and time-dependent manner. Therefore, CACNG3 plays a vital role in the occurrence and development of gliomas and can serve as a potential biomarker for targeted therapy and further investigation in the future.

Indexed as

Biomarkers, TumorBrain NeoplasmsGliomaAdultAsian PeopleCalcium ChannelsDatabases, FactualHumansPrognosisBiomarkers, TumorCACNG3 protein, humanCalcium ChannelsBiomarkerCACNG3GliomaOverall survivalPrognostic factor

Identifiers

PMID37697240
PMCPMC10494363
OpenAlexW4386615151

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.