Evidence map›Paper›PMID 37697004›Full record

ArticleNature chemical biology2024

Molecular basis and engineering of miniature Cas12f with C-rich PAM specificity.

Mengjiao Su, Fan Li, Yujue Wang, Yan Gao, Weiqi Lan, Zhiwei Shao, Chen Zhu, Na Tang, Jianhua Gan, Zhaowei Wu and 1 more

Abstract read
PubMed Publisher
In one paragraph

Article in Nature chemical biology, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 29 papers.

0numbers the graph read from it
0cells of the map it votes in
29citing papers in PubMed
4.5field-weighted citation impact, top 5% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

29 citing papers in PubMed, 29 citations in OpenAlex.

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  14. Engineered Un1Cas12f1 with boosted gene-editing activity and expanded genomic coverage.Proceedings of the National Academy of Sciences of the United States of America · 2025
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 2 institutions in 1 country.

Mengjiao Su *School of Physical Science and Technology, ShanghaiTech University, Shanghai, China.
Fan Li *School of Physical Science and Technology, ShanghaiTech University, Shanghai, China.
Yujue Wang *School of Physical Science and Technology, ShanghaiTech University, Shanghai, China.
Yan GaoShanghai Institute for Advanced Immunochemical Studies and School of Life Science and Technology, ShanghaiTech University, Shanghai, China.ORCID 0000-0002-0364-6427
Weiqi LanShanghai Institute for Advanced Immunochemical Studies and School of Life Science and Technology, ShanghaiTech University, Shanghai, China.
Zhiwei ShaoSchool of Life Sciences, Fudan University, Shanghai, China.
Chen ZhuShanghai Institute for Advanced Immunochemical Studies and School of Life Science and Technology, ShanghaiTech University, Shanghai, China.
Na TangSchool of Physical Science and Technology, ShanghaiTech University, Shanghai, China.
Jianhua GanSchool of Life Sciences, Fudan University, Shanghai, China.ORCID 0000-0002-8438-8852
Zhaowei WuSchool of Physical Science and Technology, ShanghaiTech University, Shanghai, China. wuzw1@shanghaitech.edu.cn.ORCID 0000-0001-8952-0181
Quanjiang JiSchool of Physical Science and Technology, ShanghaiTech University, Shanghai, China. quanjiangji@shanghaitech.edu.cn.ORCID 0000-0002-2321-8462
ShanghaiTech University · CNFudan University · CN

Funding

National Science Foundation of China | National Natural Science Foundation of China-Yunnan Joint Fund (NSFC-Yunnan Joint Fund) 22207074
6 · The paper itself

Abstract

CRISPR-Cas12f nucleases are currently one of the smallest genome editors, exhibiting advantages for efficient delivery via cargo-size-limited adeno-associated virus delivery vehicles. Most characterized Cas12f nucleases recognize similar T-rich protospacer adjacent motifs (PAMs) for DNA targeting, substantially restricting their targeting scope. Here we report the cryogenic electron microscopy structure and engineering of a miniature Clostridium novyi Cas12f1 nuclease (CnCas12f1, 497 amino acids) with rare C-rich PAM specificity. Structural characterizations revealed detailed PAM recognition, asymmetric homodimer formation and single guide RNA (sgRNA) association mechanisms. sgRNA engineering transformed CRISPR-CnCas12f1, which initially was incapable of genome targeting in bacteria, into an effective genome editor in human cells. Our results facilitate further understanding of CRISPR-Cas12f1 working mechanism and expand the mini-CRISPR toolbox.

Indexed as

CRISPR-Cas SystemsRNA, Guide, CRISPR-Cas SystemsClustered Regularly Interspaced Short Palindromic RepeatsDNAEndonucleasesGene EditingGenomeHumansDNAEndonucleasesRNA, Guide, CRISPR-Cas Systems

Identifiers

PMID37697004
OpenAlexW4386600112

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.