Evidence map›Paper›PMID 37696818›Full record

ArticleNature communications2023

A split and inducible adenine base editor for precise in vivo base editing.

Hongzhi Zeng, Qichen Yuan, Fei Peng, Dacheng Ma, Ananya Lingineni, Kelly Chee, Peretz Gilberd, Emmanuel C Osikpa, Zheng Sun, Xue Gao

Open access · goldAbstract read
In one paragraph

Article in Nature communications, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 23 papers.

0numbers the graph read from it
0cells of the map it votes in
23citing papers in PubMed
4.5field-weighted citation impact, top 5% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

23 citing papers in PubMed, 29 citations in OpenAlex.

  1. Review
  2. Article
  3. Article
  4. Precision A3G base editors for disease modeling and correction.Molecular therapy : the journal of the American Society of Gene Therapy · 2026
    Article
  5. Review
  6. Article
  7. Article
  8. Review
  9. Article
  10. Article
  11. Article
  12. Article
  13. Recent advances in therapeutic gene-editing technologies.Molecular therapy : the journal of the American Society of Gene Therapy · 2025
    Review
  14. Article
  15. Efforts to Downsize Base Editors for Clinical Applications.International journal of molecular sciences · 2025
    Review
  16. Article
  17. Review
  18. Article
  19. Characterization of NiCas12b for In Vivo Genome Editing.Advanced science (Weinheim, Baden-Wurttemberg, Germany) · 2024
    Article
  20. Deconstructing cancer with precision genome editing.Biochemical Society transactions · 2024
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 2 institutions in 1 country.

Hongzhi ZengDepartment of Chemical and Biomolecular Engineering, Rice University, Houston, TX, 77005, USA.ORCID http://orcid.org/0000-0002-9065-4109
Qichen Yuan *Department of Chemical and Biomolecular Engineering, Rice University, Houston, TX, 77005, USA.ORCID http://orcid.org/0000-0001-6776-0213
Fei Peng *Department of Medicine, Division of Diabetes, Endocrinology and Metabolism, Baylor College of Medicine, Houston, TX, 77030, USA.ORCID http://orcid.org/0000-0002-5446-9854
Dacheng Ma *Department of Chemical and Biomolecular Engineering, Rice University, Houston, TX, 77005, USA.
Ananya LingineniDepartment of Bioengineering, Rice University, Houston, TX, 77005, USA.
Kelly CheeDepartment of Biosciences, Rice University, Houston, TX, 77005, USA.
Peretz GilberdDepartment of Biosciences, Rice University, Houston, TX, 77005, USA.ORCID http://orcid.org/0009-0002-7684-2573
Emmanuel C OsikpaDepartment of Chemical and Biomolecular Engineering, Rice University, Houston, TX, 77005, USA.ORCID http://orcid.org/0009-0005-2540-5121
Zheng SunDepartment of Medicine, Division of Diabetes, Endocrinology and Metabolism, Baylor College of Medicine, Houston, TX, 77030, USA. zheng.sun@bcm.edu.ORCID http://orcid.org/0000-0002-6858-0633
Xue GaoDepartment of Chemical and Biomolecular Engineering, Rice University, Houston, TX, 77005, USA. xue.gao@rice.edu.ORCID http://orcid.org/0000-0003-3213-9704
Rice University · USBaylor College of Medicine · US

Funding

Tumor BiologyP30CA125123 · NCI · BAYLOR COLLEGE OF MEDICINE · PI Michael M Ittmann · 2007 to 2026
$73.9M
Tissue ResourceP50CA126752 · NCI · BAYLOR COLLEGE OF MEDICINE · PI Leonid S Metelitsa · 2007 to 2026
$51.4M
Tissue Analysis & Molecular Imaging CoreP30DK056338 · NIDDK · BAYLOR COLLEGE OF MEDICINE · PI James Versalovic · 2001 to 2026
$28.3M
Translational Research Support CoreP30ES030285 · NIEHS · BAYLOR COLLEGE OF MEDICINE · PI Casey W Wright · 2019 to 2026
$14.7M
Develop High-Precision and Multiplex Base Editing Approaches for Therapeutic ApplicationsR01HL157714 · NHLBI · UNIVERSITY OF PENNSYLVANIA · PI GAO, XUE · 2021 to 2024
$2.0M
Epigenomic Remodeling of Metabolism by Exercise through AP-1R01DK111436 · NIDDK · BAYLOR COLLEGE OF MEDICINE · PI SUN, ZHENG · 2017 to 2020
$2.0M
Circadian clock gene Rev-erb in memory dysfunction in Alzheimer's diseaseRF1AG069966 · NIA · BAYLOR COLLEGE OF MEDICINE · PI SUN, ZHENG · 2021 to 2021
$1.8M
Circadian clock gene Rev-erb in memory dysfunction in Alzheimer's diseaseR01AG069966 · NIA · BAYLOR COLLEGE OF MEDICINE · PI SUN, ZHENG · 2024 to 2025
$1.1M
NCI NIH HHS P30 CA125123NCI NIH HHS P50 CA126752NHLBI NIH HHS R01 HL157714NIA NIH HHS R01 AG069966NIA NIH HHS RF1 AG069966NIDDK NIH HHS P30 DK056338NIDDK NIH HHS R01 DK111436NIEHS NIH HHS P30 ES030285
6 · The paper itself

Abstract

DNA base editors use deaminases fused to a programmable DNA-binding protein for targeted nucleotide conversion. However, the most widely used TadA deaminases lack post-translational control in living cells. Here, we present a split adenine base editor (sABE) that utilizes chemically induced dimerization (CID) to control the catalytic activity of the deoxyadenosine deaminase TadA-8e. sABE shows high on-target editing activity comparable to the original ABE with TadA-8e (ABE8e) upon rapamycin induction while maintaining low background activity without induction. Importantly, sABE exhibits a narrower activity window on DNA and higher precision than ABE8e, with an improved single-to-double ratio of adenine editing and reduced genomic and transcriptomic off-target effects. sABE can achieve gene knockout through multiplex splice donor disruption in human cells. Furthermore, when delivered via dual adeno-associated virus vectors, sABE can efficiently convert a single A•T base pair to a G•C base pair on the PCSK9 gene in mouse liver, demonstrating in vivo CID-controlled DNA base editing. Thus, sABE enables precise control of base editing, which will have broad implications for basic research and in vivo therapeutic applications.

Indexed as

AdenineProprotein Convertase 9AnimalsGene EditingHumansMiceNucleotidesAdenineNucleotidesPCSK9 protein, humanProprotein Convertase 9

Identifiers

PMID37696818
PMCPMC10495389
OpenAlexW4386606832

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.