Evidence map›Paper›PMID 37695605›Full record

ArticleInvestigative ophthalmology & visual science2023

TMEM132D and VIPR2 Polymorphisms as Genetic Risk Loci for Retinal Detachment: A Genome-Wide Association Study and Polygenic Risk Score Analysis.

Hao-Kai Chuang, Ai-Ru Hsieh, Tien-Yap Ang, Szu-Wen Chen, Yi-Ping Yang, Hung-Juei Huang, Shih-Hwa Chiou, Tai-Chi Lin, Shih-Jen Chen, Chih-Chien Hsu and 1 more

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Article in Investigative ophthalmology & visual science, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

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2citing papers in PubMed
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1 · What the graph read from it

What it found

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2 · The registry

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3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

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4 · The record

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5 · Who and what money

Authors and funding

11 authors.

Hao-Kai ChuangDepartment of Medical Research, Taipei Veterans General Hospital, Taipei, Taiwan.
Ai-Ru HsiehDepartment of Statistics, Tamkang University, New Taipei City, Taiwan.
Tien-Yap AngDepartment of Statistics, Tamkang University, New Taipei City, Taiwan.
Szu-Wen ChenDepartment of Statistics, Tamkang University, New Taipei City, Taiwan.
Yi-Ping YangDepartment of Medical Research, Taipei Veterans General Hospital, Taipei, Taiwan.
Hung-Juei HuangDepartment of Medical Research, Taipei Veterans General Hospital, Taipei, Taiwan.
Shih-Hwa ChiouDepartment of Medical Research, Taipei Veterans General Hospital, Taipei, Taiwan.
Tai-Chi LinDepartment of Medical Research, Taipei Veterans General Hospital, Taipei, Taiwan.
Shih-Jen ChenDepartment of Medical Research, Taipei Veterans General Hospital, Taipei, Taiwan.
Chih-Chien HsuDepartment of Medical Research, Taipei Veterans General Hospital, Taipei, Taiwan.
De-Kuang HwangDepartment of Medical Research, Taipei Veterans General Hospital, Taipei, Taiwan.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Purpose: Retinal detachment (RD) is a sight-threatening ocular disease caused by separation of the neurosensory retina from the underlying retinal pigment epithelium layer. Its genetic basis is unclear because of a limited amount of data. In this study, we aimed to identify genetic risk loci associated with RD in participants without diabetes mellitus and to construct a polygenic risk score (PRS) to predict the risk of RD. Methods: A genome-wide association study was conducted using data from the Taiwan Biobank to identify RD risk loci. A total of 1533 RD cases and 106,270 controls were recruited, all of whom were Han Chinese. Replication studies were performed using data from the UK Biobank and Biobank Japan. To construct the PRS, a traditional clumping and thresholding method was performed and validated by fivefold cross-validation. Results: Two novel loci with significant associations were identified. These two genes were TMEM132D (lead single nucleotide polymorphism [SNP]: rs264498, adjusted-P = 7.18 × 10-9) and VIPR2 (lead SNP: rs3812305, adjusted-P = 8.38 × 10-9). The developed PRS was effective in discriminating individuals at high risk of RD with a dose-response relationship. The quartile with the highest risk had an odds ratio of 1244.748 compared to the lowest risk group (95% confidence interval, 175.174-8844.892). Conclusions: TMEM132D and VIPR2 polymorphisms are genetic candidates linked to RD in Han Chinese populations. Our proposed PRS was effective at discriminating high-risk from low-risk individuals.

Indexed as

Retinal DetachmentGenome-Wide Association StudyHumansMembrane ProteinsPolymorphism, Single NucleotideReceptors, Vasoactive Intestinal Peptide, Type IIRetinaRisk FactorsMembrane ProteinsReceptors, Vasoactive Intestinal Peptide, Type IITMEM132D protein, humanVIPR2 protein, human

Identifiers

PMID37695605
PMCPMC10501492

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.