Evidence map›Paper›PMID 37694452›Full record

ArticleCancer medicine2023

An interpretable deep learning framework for predicting liver metastases in postoperative colorectal cancer patients using natural language processing and clinical data integration.

Jia Li, Xinghao Wang, Linkun Cai, Jing Sun, Zhenghan Yang, Wenjuan Liu, Zhenchang Wang, Han Lv

Abstract read
In one paragraph

Article in Cancer medicine, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed, 1 pooled it
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 1 synthesis or guideline pooled it.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

Jia LiDepartment of Radiology, Beijing Friendship Hospital, Capital Medical University, Beijing, People's Republic of China.ORCID 0009-0008-8351-4336
Xinghao WangDepartment of Radiology, Beijing Friendship Hospital, Capital Medical University, Beijing, People's Republic of China.
Linkun CaiDepartment of Radiology, Beijing Friendship Hospital, Capital Medical University, Beijing, People's Republic of China.
Jing SunDepartment of Radiology, Beijing Friendship Hospital, Capital Medical University, Beijing, People's Republic of China.
Zhenghan YangDepartment of Radiology, Beijing Friendship Hospital, Capital Medical University, Beijing, People's Republic of China.
Wenjuan LiuDepartment of Radiology, Beijing Friendship Hospital, Capital Medical University, Beijing, People's Republic of China.
Zhenchang WangDepartment of Radiology, Beijing Friendship Hospital, Capital Medical University, Beijing, People's Republic of China.ORCID 0000-0001-8190-6469
Han LvDepartment of Radiology, Beijing Friendship Hospital, Capital Medical University, Beijing, People's Republic of China.ORCID 0000-0001-9559-4777

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundThe significance of liver metastasis (LM) in increasing the risk of death for postoperative colorectal cancer (CRC) patients necessitates innovative approaches to predict LM.

aimOur study presents a novel and significant contribution by developing an interpretable fusion model that effectively integrates both free-text medical record data and structured laboratory data to predict LM in postoperative CRC patients.

methodsWe used a robust dataset of 1463 patients and leveraged state-of-the-art natural language processing (NLP) and machine learning techniques to construct a two-layer fusion framework that demonstrates superior predictive performance compared to single modal models. Our innovative two-tier algorithm fuses the results from different data modalities, achieving balanced prediction results on test data and significantly enhancing the predictive ability of the model. To increase interpretability, we employed Shapley additive explanations to elucidate the contributions of free-text clinical data and structured clinical data to the final model. Furthermore, we translated our findings into practical clinical applications by creating a novel NLP score-based nomogram using the top 13 valid predictors identified in our study.

resultsThe proposed fusion models demonstrated superior predictive performance with an accuracy of 80.8%, precision of 80.3%, recall of 80.5%, and an F1 score of 80.8% in predicting LMs.

conclusionThis fusion model represents a notable advancement in predicting LMs for postoperative CRC patients, offering the potential to enhance patient outcomes and support clinical decision-making.

Indexed as

Colorectal NeoplasmsDeep LearningAlgorithmsElectronic Health RecordsHumansNatural Language Processingartificial intelligencebidirectional encoding representation of transformerelectronic health recordsinterpretable deep learningnatural language processing

Identifiers

PMID37694452
PMCPMC10557887

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.