Evidence map›Paper›PMID 37688754›Full record

ArticleVeterinary research communications2024

Structural similarity of human papillomavirus E4 and polyomaviral VP4 exhibited by genomic analysis of the common kestrel (Falco tinnunculus) polyomavirus.

Enikő Fehér, Eszter Kaszab, János András Mótyán, Dóra Máté, Krisztina Bali, Márton Hoitsy, Endre Sós, Ferenc Jakab, Krisztián Bányai

Open access · hybridAbstract read
In one paragraph

Article in Veterinary research communications, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
0.4field-weighted citation impact, top 43% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed, 2 citations in OpenAlex.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 5 institutions in 1 country.

Enikő FehérHUN-REN Veterinary Medical Research Institute, Budapest, Hungary. feher.eniko@vmri.hun-ren.hu.ORCID https://orcid.org/0000-0001-7778-9116
Eszter KaszabHUN-REN Veterinary Medical Research Institute, Budapest, Hungary.
János András MótyánDepartment of Biochemistry and Molecular Biology, Faculty of Medicine, University of Debrecen, Debrecen, Hungary.ORCID https://orcid.org/0000-0002-6079-5621
Dóra MátéHUN-REN Veterinary Medical Research Institute, Budapest, Hungary.
Krisztina BaliHUN-REN Veterinary Medical Research Institute, Budapest, Hungary.
Márton HoitsyConservation and Veterinary Services, Budapest Zoo and Botanical Garden, Budapest, Hungary.
Endre SósConservation and Veterinary Services, Budapest Zoo and Botanical Garden, Budapest, Hungary.
Ferenc JakabNational Laboratory of Virology, Szentágothai Research Centre, University of Pécs, Pécs, Hungary.
Krisztián BányaiHUN-REN Veterinary Medical Research Institute, Budapest, Hungary.ORCID https://orcid.org/0000-0002-6270-1772
National Food Chain Safety Office · HUUniversity of Debrecen · HUUniversity of Veterinary Medicine · HUHUN-REN Veterinary Medical Research Institute · HUUniversity of Pecs · HU

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Polyomaviruses are widely distributed viruses of birds that may induce developmental deformities and internal organ disorders primarily in nestlings. In this study, polyomavirus sequence was detected in kidney and liver samples of a common kestrel (Falco tinnunculus) that succumbed at a rescue station in Hungary. The amplified 5025 nucleotide (nt) long genome contained the early (large and small T antigen, LTA and STA) and late (viral proteins, VP1, VP2, VP3) open reading frames (ORFs) typical for polyomaviruses. One of the additional putative ORFs (named VP4) showed identical localization with the VP4 and ORF-X of gammapolyomaviruses, but putative splicing sites could not be found in its sequence. Interestingly, the predicted 123 amino acid (aa) long protein sequence showed the highest similarity with human papillomavirus E4 early proteins in respect of the aa distribution and motif arrangement implying similar functions. The LTA of the kestrel polyomavirus shared <59.2% nt and aa pairwise identity with the LTA sequence of other polyomaviruses and formed a separated branch in the phylogenetic tree among gammapolyomaviruses. Accordingly, the kestrel polyomavirus may be the first member of a novel species within the Gammapolyomavirus genus, tentatively named Gammapolyomavirus faltin.

Indexed as

PolyomavirusAnimalsGenome, ViralGenomicsHuman Papillomavirus VirusesHumansPhylogenyBirdE4GenomePapillomavirusPolyomavirusVP4

Identifiers

PMID37688754
PMCPMC10810995
OpenAlexW4386572282

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.