Evidence map›Paper›PMID 37685311›Full record

ArticleDiagnostics (Basel, Switzerland)2023

Evaluation of Augmentation Methods in Classifying Autism Spectrum Disorders from fMRI Data with 3D Convolutional Neural Networks.

Johan Jönemo, David Abramian, Anders Eklund

Abstract read
In one paragraph

Article in Diagnostics (Basel, Switzerland), 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Article
  6. An Umbrella Review of the Fusion of fMRI and AI in Autism.Diagnostics (Basel, Switzerland) · 2023
    Review
  7. Article
  8. Review
  9. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors.

Johan JönemoDivision of Medical Informatics, Department of Biomedical Engineering, Linköping University, 581 83 Linköping, Sweden.
David AbramianDivision of Medical Informatics, Department of Biomedical Engineering, Linköping University, 581 83 Linköping, Sweden.
Anders EklundDivision of Medical Informatics, Department of Biomedical Engineering, Linköping University, 581 83 Linköping, Sweden.

Funding

Translational Developmental Neuroscience of AutismK23MH087770 · NIMH · NEW YORK UNIVERSITY SCHOOL OF MEDICINE · PI DI MARTINO, ADRIANA · 2010 to 2013
$644k
Enhancement of the 1000 Functional Connectome ProjectR03MH096321 · NIMH · NATHAN S. KLINE INSTITUTE FOR PSYCH RES · PI BISWAL, BHARAT BHUSAN, MILHAM, MICHAEL PETER · 2012 to 2013
$158k
NIMH NIH HHS K23 MH087770NIMH NIH HHS R03 MH096321
6 · The paper itself

Abstract

Classifying subjects as healthy or diseased using neuroimaging data has gained a lot of attention during the last 10 years, and recently, different deep learning approaches have been used. Despite this fact, there has not been any investigation regarding how 3D augmentation can help to create larger datasets, required to train deep networks with millions of parameters. In this study, deep learning was applied to derivatives from resting state functional MRI data, to investigate how different 3D augmentation techniques affect the test accuracy. Specifically, resting state derivatives from 1112 subjects in ABIDE (Autism Brain Imaging Data Exchange) preprocessed were used to train a 3D convolutional neural network (CNN) to classify each subject according to presence or absence of autism spectrum disorder. The results show that augmentation only provide minor improvements to the test accuracy.

Indexed as

augmentationautismdeep learningfunctional MRIresting state

Identifiers

PMID37685311
PMCPMC10487086

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.