Evidence map›Paper›PMID 37684690›Full record

ArticleMobile DNA2023

Retro-miRs: novel and functional miRNAs originating from mRNA retrotransposition.

Rafael L V Mercuri, Helena B Conceição, Gabriela D A Guardia, Gabriel Goldstein, Maria D Vibranovski, Ludwig C Hinske, Pedro A F Galante

Open access · goldAbstract read
In one paragraph

Article in Mobile DNA, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
1.0field-weighted citation impact, top 21% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 4 citations in OpenAlex.

  1. Article
  2. Review
  3. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 3 institutions in 3 countries.

Rafael L V Mercuri *Hospital Sirio-Libanes, São Paulo, 01308-060, Brazil.
Helena B Conceição *Hospital Sirio-Libanes, São Paulo, 01308-060, Brazil.
Gabriela D A GuardiaHospital Sirio-Libanes, São Paulo, 01308-060, Brazil.
Gabriel GoldsteinDepartment of Genetics and Evolutionary Biology, University of São Paulo, São Paulo, Brazil.
Maria D VibranovskiDepartment of Genetics and Evolutionary Biology, University of São Paulo, São Paulo, Brazil.
Ludwig C HinskeInstitute for Digital Medicine/Clinic of Anaesthesiology, University of Augsburg, Augsburg, Germany.
Pedro A F GalanteHospital Sirio-Libanes, São Paulo, 01308-060, Brazil. pgalante@mochsl.org.br.
Hospital Sírio-Libanês · BRUniversidade de São Paulo · BRUniversity of Augsburg · DE

Funding

Fundação de Amparo à Pesquisa do Estado de São Paulo 2017/19541-2Fundação de Amparo à Pesquisa do Estado de São Paulo 2018/13613-4Fundação de Amparo à Pesquisa do Estado de São Paulo 2018/15579-8Fundação de Amparo à Pesquisa do Estado de São Paulo 2020/02413-4
6 · The paper itself

Abstract

backgroundReverse-transcribed gene copies (retrocopies) have emerged as major sources of evolutionary novelty. MicroRNAs (miRNAs) are small and highly conserved RNA molecules that serve as key post-transcriptional regulators of gene expression. The origin and subsequent evolution of miRNAs have been addressed but not fully elucidated.

resultsIn this study, we performed a comprehensive investigation of miRNA origination through retroduplicated mRNA sequences (retro-miRs). We identified 17 retro-miRs that emerged from the mRNA retrocopies. Four of these retro-miRs had de novo origins within retrocopied sequences, while 13 retro-miRNAs were located within exon regions and duplicated along with their host mRNAs. We found that retro-miRs were primate-specific, including five retro-miRs conserved among all primates and two human-specific retro-miRs. All retro-miRs were expressed, with predicted and experimentally validated target genes except miR-10527. Notably, the target genes of retro-miRs are involved in key biological processes such as metabolic processes, cell signaling, and regulation of neurotransmitters in the central nervous system. Additionally, we found that these retro-miRs play a potential oncogenic role in cancer by targeting key cancer genes and are overexpressed in several cancer types, including liver hepatocellular carcinoma and stomach adenocarcinoma.

conclusionsOur findings demonstrated that mRNA retrotransposition is a key mechanism for the generation of novel miRNAs (retro-miRs) in primates. These retro-miRs are expressed, conserved, have target genes with important cellular functions, and play important roles in cancer.

Indexed as

CancerGene expressionGene originationmiRNAsRetrocopies

Identifiers

PMID37684690
PMCPMC10486083
OpenAlexW4386562899

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.