Evidence map›Paper›PMID 37683180›Full record

ArticleBlood2023

Alternative splicing of its 5'-UTR limits CD20 mRNA translation and enables resistance to CD20-directed immunotherapies.

Zhiwei Ang, Luca Paruzzo, Katharina E Hayer, Carolin Schmidt, Manuel Torres Diz, Feng Xu, Urvi Zankharia, Yunlin Zhang, Samantha Soldan, Sisi Zheng and 14 more

Open access · bronzeAbstract read
In one paragraph

Article in Blood, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 44 papers.

0numbers the graph read from it
0cells of the map it votes in
44citing papers in PubMed
6.6field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

44 citing papers in PubMed, 40 citations in OpenAlex.

  1. Trial
  2. Functional analysis ofMolecular therapy. Nucleic acids · 2026
    Article
  3. Review
  4. Article
  5. Review
  6. Article
  7. Article
  8. An upstream open reading frame represses translation of the neuronal potassium channel KCNQ2.Proceedings of the National Academy of Sciences of the United States of America · 2026
    Article
  9. Article
  10. Article
  11. Article
  12. Review
  13. Review
  14. Article
  15. Review
  16. Targeted BDNF upregulation via upstream open reading frame disruption.Molecular therapy : the journal of the American Society of Gene Therapy · 2026
    Article
  17. Review
  18. Article
  19. Article
  20. Review
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

24 authors at 3 institutions in 1 country.

Zhiwei AngDivision of Cancer Pathobiology, Children's Hospital of Philadelphia, Philadelphia, PA.ORCID 0000-0001-6583-4733
Luca ParuzzoCenter for Cellular Immunotherapies, University of Pennsylvania Perelman School of Medicine, Philadelphia, PA.ORCID 0000-0002-6505-0194
Katharina E HayerDepartment of Biomedical and Health Informatics, Children's Hospital of Philadelphia, Philadelphia, PA.ORCID 0000-0002-1463-3111
Carolin SchmidtDivision of Cancer Pathobiology, Children's Hospital of Philadelphia, Philadelphia, PA.
Manuel Torres DizDivision of Cancer Pathobiology, Children's Hospital of Philadelphia, Philadelphia, PA.ORCID 0000-0002-5487-8113
Feng XuDivision of Genomic Diagnostic, Children's Hospital of Philadelphia, Philadelphia, PA.
Urvi ZankhariaGene Expression and Regulation Program, The Wistar Institute, Philadelphia, PA.
Yunlin ZhangCenter for Cellular Immunotherapies, University of Pennsylvania Perelman School of Medicine, Philadelphia, PA.ORCID 0000-0002-5608-0615
Samantha SoldanGene Expression and Regulation Program, The Wistar Institute, Philadelphia, PA.ORCID 0000-0001-6263-519X
Sisi ZhengDivision of Cancer Pathobiology, Children's Hospital of Philadelphia, Philadelphia, PA.
Catherine D FalkensteinDivision of Oncology, Children's Hospital of Philadelphia, Philadelphia, PA.
Joseph P LoftusDivision of Oncology, Children's Hospital of Philadelphia, Philadelphia, PA.
Scarlett Y YangDivision of Cancer Pathobiology, Children's Hospital of Philadelphia, Philadelphia, PA.ORCID 0000-0002-9398-7363
Mukta AsnaniDivision of Cancer Pathobiology, Children's Hospital of Philadelphia, Philadelphia, PA.
Patricia King SainosDepartment of Biology, University of Pennsylvania, Philadelphia, PA.
Vinodh PillaiDivision of Hematopathology, Children's Hospital of Philadelphia, Philadelphia, PA.
Emeline ChongLymphoma Program, Abramson Cancer Center, University of Pennsylvania, Philadelphia, PA.
Marilyn M LiDivision of Genomic Diagnostic, Children's Hospital of Philadelphia, Philadelphia, PA.
Sarah K TasianDivision of Oncology, Children's Hospital of Philadelphia, Philadelphia, PA.ORCID 0000-0003-1327-1662
Yoseph BarashDepartment of Genetics, Perelman School of Medicine at the University of Pennsylvania, Philadelphia, PA.ORCID 0000-0003-3005-5048
Paul M LiebermanGene Expression and Regulation Program, The Wistar Institute, Philadelphia, PA.
Marco RuellaCenter for Cellular Immunotherapies, University of Pennsylvania Perelman School of Medicine, Philadelphia, PA.ORCID 0000-0003-4301-5811
Stephen J SchusterLymphoma Program, Abramson Cancer Center, University of Pennsylvania, Philadelphia, PA.
Andrei Thomas-TikhonenkoDivision of Cancer Pathobiology, Children's Hospital of Philadelphia, Philadelphia, PA.ORCID 0000-0002-2739-2206
Children's Hospital of Philadelphia · USUniversity of Pennsylvania · USThe Wistar Institute · US

Funding

Tumor Microenvironment and MetastasisP30CA010815 · NCI · WISTAR INSTITUTE · PI Aaron Robert Goldman · 1985 to 2026
$75.9M
CANCER RESEARCH TRAINING PROGRAMT32CA009615 · NCI · UNIVERSITY OF PENNSYLVANIA · PI Gregory L Beatty, MICHAEL D HOGARTY · 1988 to 2026
$10.4M
Multispecific targeting incorporating cytokine receptor pathways in high risk pediatric acute leukemias to improve durability of adoptive cell therapy-induced remissionsU01CA232486 · NCI · UNIVERSITY OF COLORADO DENVER · PI FRY, TERRY J., TASIAN, SARAH KATHLEEN · 2018 to 2018
$4.0M
Cassette exons in neoplastic pro-B-cells: implications for immunotherapyU01CA232563 · NCI · CHILDREN'S HOSP OF PHILADELPHIA · PI BARASH, YOSEPH, THOMAS-TIKHONENKO, ANDREI · 2018 to 2022
$3.5M
Towards rational design of combination therapeutic targetsU01CA243072 · NCI · CHILDREN'S HOSP OF PHILADELPHIA · PI TAN, KAI, TASIAN, SARAH KATHLEEN · 2020 to 2024
$2.6M
NCI NIH HHS P30 CA010815NCI NIH HHS T32 CA009615NCI NIH HHS U01 CA232486NCI NIH HHS U01 CA232563NCI NIH HHS U01 CA243072
6 · The paper itself

Abstract

Aberrant skipping of coding exons in CD19 and CD22 compromises the response to immunotherapy in B-cell malignancies. Here, we showed that the MS4A1 gene encoding human CD20 also produces several messenger RNA (mRNA) isoforms with distinct 5' untranslated regions. Four variants (V1-4) were detected using RNA sequencing (RNA-seq) at distinct stages of normal B-cell differentiation and B-lymphoid malignancies, with V1 and V3 being the most abundant. During B-cell activation and Epstein-Barr virus infection, redirection of splicing from V1 to V3 coincided with increased CD20 positivity. Similarly, in diffuse large B-cell lymphoma, only V3, but not V1, correlated with CD20 protein levels, suggesting that V1 might be translation-deficient. Indeed, the longer V1 isoform contained upstream open reading frames and a stem-loop structure, which cooperatively inhibited polysome recruitment. By modulating CD20 isoforms with splice-switching morpholino oligomers, we enhanced CD20 expression and anti-CD20 antibody rituximab-mediated cytotoxicity in a panel of B-cell lines. Furthermore, reconstitution of CD20-knockout cells with V3 mRNA led to the recovery of CD20 positivity, whereas V1-reconstituted cells had undetectable levels of CD20 protein. Surprisingly, in vitro CD20-directed chimeric antigen receptor T cells were able to kill both V3- and V1-expressing cells, but the bispecific T-cell engager mosunetuzumab was only effective against V3-expressing cells. To determine whether CD20 splicing is involved in immunotherapy resistance, we performed RNA-seq on 4 postmosunetuzumab follicular lymphoma relapses and discovered that in 2 of them, the downregulation of CD20 was accompanied by a V3-to-V1 shift. Thus, splicing-mediated mechanisms of epitope loss extend to CD20-directed immunotherapies.

Indexed as

Epstein-Barr Virus InfectionsNeoplasms5' Untranslated RegionsAlternative SplicingAntigens, CD20Herpesvirus 4, HumanHumansImmunotherapyProtein BiosynthesisProtein IsoformsRNA, Messenger5' Untranslated RegionsAntigens, CD20Protein IsoformsRNA, Messenger

Identifiers

PMID37683180
PMCPMC10667349
OpenAlexW4386553762

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.