Evidence map›Paper›PMID 37683046›Full record

Observational studyPLoS medicine2023

Real-time surveillance of international SARS-CoV-2 prevalence using systematic traveller arrival screening: An observational study.

Adam J Kucharski, Kiyojiken Chung, Maite Aubry, Iotefa Teiti, Anita Teissier, Vaea Richard, Timothy W Russell, Raphaëlle Bos, Sophie Olivier, Van-Mai Cao-Lormeau

Open access · goldAbstract readObservational Study
In one paragraph

Observational study in PLoS medicine, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
3.7field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 15 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 2 institutions in 2 countries.

Adam J KucharskiCentre for Mathematical Modelling of Infectious Diseases, London School of Hygiene & Tropical Medicine, London, United Kingdom.ORCID 0000-0001-8814-9421
Kiyojiken ChungLaboratory of Research on Emerging Viral Diseases, Institut Louis Malardé, Papeete, French Polynesia.ORCID 0000-0003-3181-8326
Maite AubryLaboratory of Research on Emerging Viral Diseases, Institut Louis Malardé, Papeete, French Polynesia.ORCID 0000-0002-9913-5794
Iotefa TeitiLaboratory of Research on Emerging Viral Diseases, Institut Louis Malardé, Papeete, French Polynesia.ORCID 0000-0001-8921-1178
Anita TeissierLaboratory of Research on Emerging Viral Diseases, Institut Louis Malardé, Papeete, French Polynesia.
Vaea RichardLaboratory of Research on Emerging Viral Diseases, Institut Louis Malardé, Papeete, French Polynesia.ORCID 0000-0001-8132-0740
Timothy W RussellCentre for Mathematical Modelling of Infectious Diseases, London School of Hygiene & Tropical Medicine, London, United Kingdom.ORCID 0000-0001-5610-6080
Raphaëlle BosClinical Laboratory, Institut Louis Malardé, Papeete, French Polynesia.
Sophie OlivierClinical Laboratory, Institut Louis Malardé, Papeete, French Polynesia.
Van-Mai Cao-LormeauLaboratory of Research on Emerging Viral Diseases, Institut Louis Malardé, Papeete, French Polynesia.
Institut Louis Malardé · PFLondon School of Hygiene & Tropical Medicine · GB

Funding

Department of Health NIHR200908Wellcome Trust 206250/Z/17/Z
6 · The paper itself

Abstract

backgroundEffective Coronavirus Disease 2019 (COVID-19) response relies on good knowledge of population infection dynamics, but owing to under-ascertainment and delays in symptom-based reporting, obtaining reliable infection data has typically required large dedicated local population studies. Although many countries implemented Severe Acute Respiratory Syndrome Coronavirus 2 (SARS-CoV-2) testing among travellers, it remains unclear how accurately arrival testing data can capture international patterns of infection, because those arrival testing data were rarely reported systematically, and predeparture testing was often in place as well, leading to nonrepresentative infection status among arrivals. METHODS AND

findingsIn French Polynesia, testing data were reported systematically with enforced predeparture testing type and timing, making it possible to adjust for nonrepresentative infection status among arrivals. Combining statistical models of polymerase chain reaction (PCR) positivity with data on international travel protocols, we reconstructed estimates of prevalence at departure using only testing data from arrivals. We then applied this estimation approach to the United States of America and France, using data from over 220,000 tests from travellers arriving into French Polynesia between July 2020 and March 2022. We estimated a peak infection prevalence at departure of 2.1% (95% credible interval: 1.7, 2.6%) in France and 1% (95% CrI: 0.63, 1.4%) in the USA in late 2020/early 2021, with prevalence of 4.6% (95% CrI: 3.9, 5.2%) and 4.3% (95% CrI: 3.6, 5%), respectively, estimated for the Omicron BA.1 waves in early 2022. We found that our infection estimates were a leading indicator of later reported case dynamics, as well as being consistent with subsequent observed changes in seroprevalence over time. We did not have linked data on traveller demography or unbiased domestic infection estimates (e.g., from random community infection surveys) in the USA and France. However, our methodology would allow for the incorporation of prior data from additional sources if available in future.

conclusionsAs well as elucidating previously unmeasured infection dynamics in these countries, our analysis provides a proof-of-concept for scalable and accurate leading indicator of global infections during future pandemics.

Indexed as

COVID-19SARS-CoV-2FranceHumansPrevalenceSeroepidemiologic Studies

Identifiers

PMID37683046
PMCPMC10516411
OpenAlexW4386552841

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.