Evidence map›Paper›PMID 37681958›Full record

ArticleJournal of virology2023

Broadly neutralizing antibody epitopes on HIV-1 particles are exposed after virus interaction with host cells.

Priyanka Gadam Rao, Gregory S Lambert, Chitra Upadhyay

Open access · hybridAbstract read
In one paragraph

Article in Journal of virology, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
0.6field-weighted citation impact, top 35% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 4 citations in OpenAlex.

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4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

3 authors at 1 institution in 1 country.

Priyanka Gadam RaoDivision of Infectious Disease, Department of Medicine, Icahn School of Medicine at Mount Sinai , New York, New York, USA.ORCID 0009-0004-6219-5429
Gregory S LambertDivision of Infectious Disease, Department of Medicine, Icahn School of Medicine at Mount Sinai , New York, New York, USA.ORCID 0000-0003-2808-4341
Chitra UpadhyayDivision of Infectious Disease, Department of Medicine, Icahn School of Medicine at Mount Sinai , New York, New York, USA.ORCID 0000-0002-4524-1532
Icahn School of Medicine at Mount Sinai · US

Funding

Modulating antigenic and immunogenic properties of HIV Env by altering signal sequenceR01AI140909 · NIAID · ICAHN SCHOOL OF MEDICINE AT MOUNT SINAI · PI UPADHYAY, CHITRA · 2019 to 2023
$3.3M
NIAID NIH HHS R01 AI140909
6 · The paper itself

Abstract

The envelope (Env) glycoproteins on HIV-1 virions are the sole target of broadly neutralizing antibodies (bNAbs) and the focus of vaccines. However, many cross-reactive conserved epitopes are often occluded on virus particles, contributing to the evasion of humoral immunity. This study aimed to identify the Env epitopes that are exposed/occluded on HIV-1 particles and to investigate the mechanisms contributing to their masking. Using a flow cytometry-based assay, three HIV-1 isolates, and a panel of antibodies, we show that only select epitopes, including V2i, the gp120-g41 interface, and gp41-MPER, are accessible on HIV-1 particles, while V3, V2q, and select CD4bs epitopes are masked. These epitopes become accessible after allosteric conformational changes are induced by the pre-binding of select Abs, prompting us to test if similar conformational changes are required for these Abs to exhibit their neutralization capability. We tested HIV-1 neutralization where the virus-mAb mix was pre-incubated/not pre-incubated for 1 hour prior to adding the target cells. Similar levels of neutralization were observed under both assay conditions, suggesting that the interaction between virus and target cells sensitizes the virions for neutralization via bNAbs. We further show that lectin-glycan interactions can also expose these epitopes. However, this effect is dependent on the lectin specificity. Given that, bNAbs are ideal for providing sterilizing immunity and are the goal of current HIV-1 vaccine efforts, these data offer insight on how HIV-1 may occlude these vulnerable epitopes from the host immune response. In addition, the findings can guide the formulation of effective antibody combinations for therapeutic use. IMPORTANCE The human immunodeficiency virus (HIV-1) envelope (Env) glycoprotein mediates viral entry and is the sole target of neutralizing antibodies. Our data suggest that antibody epitopes including V2q (e.g., PG9, PGT145), CD4bs (e.g., VRC01, 3BNC117), and V3 (2219, 2557) are masked on HIV-1 particles. The PG9 and 2219 epitopes became accessible for binding after conformational unmasking was induced by the pre-binding of select mAbs. Attempts to understand the masking mechanism led to the revelation that interaction between virus and host cells is needed to sensitize the virions for neutralization by broadly neutralizing antibodies (bNAbs). These data provide insight on how bNAbs may gain access to these occluded epitopes to exert their neutralization effects and block HIV-1 infection. These findings have important implications for the way we evaluate the neutralizing efficacy of antibodies and can potentially guide vaccine design.

Indexed as

Broadly Neutralizing AntibodiesEpitopes, B-LymphocyteHIV-1HIV AntibodiesHIV InfectionsHost Microbial InteractionsAIDS VaccinesAntibodies, MonoclonalHIV Envelope Protein gp120HumansLectinsPolysaccharidesVirionAIDS VaccinesAntibodies, MonoclonalBroadly Neutralizing AntibodiesEpitopes, B-LymphocyteHIV AntibodiesHIV Envelope Protein gp120LectinsPolysaccharidesantibodiesbroadly neutralizing antibodies (bNAbs)envelope conformationsglycansglycosylationhuman immunodeficiency viruslectinsneutralizationnon-neutralizing antibodies (nNAbs)

Identifiers

PMID37681958
PMCPMC10537810
OpenAlexW4386529782

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.