Evidence map›Paper›PMID 37681034›Full record

ArticleNAR cancer2023

Inhibition of nonsense-mediated mRNA decay reduces the tumorigenicity of human fibrosarcoma cells.

Sofia Nasif, Martino Colombo, Anne-Christine Uldry, Markus S Schröder, Simone de Brot, Oliver Mühlemann

Open access · goldAbstract read
In one paragraph

Article in NAR cancer, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
1.8field-weighted citation impact, top 14% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed, 12 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 1 country.

Sofia NasifDepartment of Chemistry, Biochemistry and Pharmaceutical Sciences, University of Bern, Switzerland.ORCID https://orcid.org/0000-0001-7536-1415
Martino ColomboDepartment of Chemistry, Biochemistry and Pharmaceutical Sciences, University of Bern, Switzerland.ORCID https://orcid.org/0000-0001-5433-2623
Anne-Christine UldryProteomics & Mass Spectrometry Core Facility, Department for BioMedical Research, University of Bern, Switzerland.ORCID https://orcid.org/0000-0003-2820-0277
Markus S SchröderNCCR RNA & Disease Bioinformatics Support,Department of Biology, ETH Zürich, Switzerland.ORCID https://orcid.org/0000-0002-1602-0343
Simone de BrotCOMPATH, Institute of Animal Pathology, University of Bern, Switzerland.ORCID https://orcid.org/0000-0003-3049-0103
Oliver MühlemannDepartment of Chemistry, Biochemistry and Pharmaceutical Sciences, University of Bern, Switzerland.ORCID https://orcid.org/0000-0003-0657-1368
University of Bern · CHSIB Swiss Institute of Bioinformatics · CH

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Nonsense-mediated mRNA decay (NMD) is a eukaryotic RNA decay pathway with roles in cellular stress responses, differentiation, and viral defense. It functions in both quality control and post-transcriptional regulation of gene expression. NMD has also emerged as a modulator of cancer progression, although available evidence supports both a tumor suppressor and a pro-tumorigenic role, depending on the model. To further investigate the role of NMD in cancer, we knocked out the NMD factor SMG7 in the HT1080 human fibrosarcoma cell line, resulting in suppression of NMD function. We then compared the oncogenic properties of the parental cell line, the SMG7-knockout, and a rescue cell line in which we re-introduced both isoforms of SMG7. We also tested the effect of a drug inhibiting the NMD factor SMG1 to distinguish NMD-dependent effects from putative NMD-independent functions of SMG7. Using cell-based assays and a mouse xenograft tumor model, we showed that suppression of NMD function severely compromises the oncogenic phenotype. Molecular pathway analysis revealed that NMD suppression strongly reduces matrix metalloprotease 9 (MMP9) expression and that MMP9 re-expression partially rescues the oncogenic phenotype. Since MMP9 promotes cancer cell migration and invasion, metastasis and angiogenesis, its downregulation may contribute to the reduced tumorigenicity of NMD-suppressed cells. Collectively, our results highlight the potential value of NMD inhibition as a therapeutic approach.

Identifiers

PMID37681034
PMCPMC10480688
OpenAlexW4386486827

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.