Evidence map›Paper›PMID 37680672›Full record

ArticleGerms2022

Association between vitamin D receptor gene polymorphisms and fibrosis susceptibility in Greek patients with HCV infection.

Angeliki Anna Beka, Vasileios Papadopoulos, Theodora Mylopoulou, Maria Panopoulou, Ioannis Karakasiliotis, Penelope Mavromara, Konstantinos Mimidis, Stavroula Veletza

Open access · greenAbstract read
In one paragraph

Article in Germs, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
0.1field-weighted citation impact, top 48% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed, 1 citations in OpenAlex.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 3 institutions in 1 country.

Angeliki Anna BekaMSc, Democritus University of Thrace, Department of Molecular Biology and Genetics, Laboratory of Biochemistry and Molecular Virology, Dragana, 68100, Alexandroupolis, Greece.
Vasileios PapadopoulosMD, ENARGEIA Medical Ltd., Michael Karaoli 8 & Elpidos 6, 67131, Xanthi, Greece.
Theodora MylopoulouMD, PhD, University General Hospital of Alexandroupolis, First Department of Internal Medicine, Dragana, 68100, Alexandroupolis, Greece.
Maria PanopoulouMD, Associate Professor, Democritus University of Thrace, Department of Medicine, Laboratory of Microbiology, Dragana, 68100, Alexandroupolis, Greece.
Ioannis KarakasiliotisAssociate Professor, Democritus University of Thrace, Department of Medicine, Laboratory of Biology, Dragana, 68100, Alexandroupolis, Greece.
Penelope MavromaraProfessor, Democritus University of Thrace, Department of Molecular Biology and Genetics, Laboratory of Biochemistry and Molecular Virology, Dragana, 68100, Alexandroupolis, Greece.
Konstantinos MimidisMD, Professor, University General Hospital of Alexandroupolis, First Department of Internal Medicine, Dragana, 68100, Alexandroupolis, Greece.
Stavroula VeletzaProfessor, Democritus University of Thrace, Department of Medicine, Laboratory of Biology, Dragana, 68100, Alexandroupolis, Greece.
Democritus University of Thrace · GRUniversity Hospital of Alexandroupolis · GRAthena Research and Innovation Center In Information Communication & Knowledge Technologies · GR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Introduction: Hepatitis C virus (HCV) infection is a prime cause of chronic hepatitis worldwide, that often silently progresses to fibrosis, cirrhosis and hepatocellular carcinoma (HCC). Notably, the majority of individuals infected with HCV develop symptoms at late stages, often associated with liver damage that cannot revert after virus clearance. Thus, current antiviral therapy alone is rather insufficient to eliminate the global burden of HCV in the near future.During the past few years, vitamin D deficiency as well as certain single nucleotide polymorphisms in the vitamin D receptor (VDR) gene have been associated with liver fibrosis. Therefore, the aim of the present study was to investigate the possible correlation between VDR polymorphisms ApaI (rs7975232) and TaqI (rs731236) and the fibrosis stage of patients with HCV infection from Thrace, Greece. Methods: Eighty-one patients with HCV infection underwent transient elastography for the assessment of their fibrosis stage, and PCR-restriction fragment length polymorphism (RFLP) genotyping for VDR ApaI and TaqI polymorphisms. VDR genotypes were then statistically associated with the patients' fibrosis stage using ordinal regression models. Results: Non-cirrhotic stages were positively correlated with TaqI TT genotype (p=0.003) and negatively correlated with TaqI TC genotype (p=0.007). In the presence of Hardy-Weinberg equilibrium and linkage disequilibrium between the two VDR polymorphisms, mild fibrosis stages (F0-2) were correlated with ApaI/TaqI GG/TT (p=0.002) and TG/TT (p=0.008) genotypes, while cirrhotic stage F4 was associated with ApaI/TaqI TG/TC genotype (p=0.038). Conclusions: TaqI TT and ApaI/TaqI GG/TT, TG/TT and TG/TC genotypes could be explored as prognostic genetic markers for fibrosis susceptibility in HCV patients.

Indexed as

calcitriol receptorFibrosisgenetic markershepatitis Cliversingle nucleotide polymorphismvitamin D

Identifiers

PMID37680672
PMCPMC10482479
OpenAlexW4386529340

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.