Evidence map›Paper›PMID 37679636›Full record

ArticleMethods in molecular biology (Clifton, N.J.)2023

Mapping Polyclonal Antibody Responses to Infection Using Next-Generation Phage Display.

Maria T Tsoumpeli, Anitha Varghese, Jonathan P Owen, Ben C Maddison, Janet M Daly, Kevin C Gough

Abstract read
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In one paragraph

Article in Methods in molecular biology (Clifton, N.J.), 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

  1. Article
  2. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Maria T TsoumpeliSchool of Veterinary Medicine and Science, University of Nottingham, Sutton Bonington, Leicestershire, UK.
Anitha VargheseSchool of Veterinary Medicine and Science, University of Nottingham, Sutton Bonington, Leicestershire, UK.
Jonathan P OwenRSK-ADAS Ltd, Beeston, Nottinghamshire, UK.
Ben C MaddisonRSK-ADAS Ltd, Beeston, Nottinghamshire, UK.
Janet M DalySchool of Veterinary Medicine and Science, University of Nottingham, Sutton Bonington, Leicestershire, UK.
Kevin C GoughSchool of Veterinary Medicine and Science, University of Nottingham, Sutton Bonington, Leicestershire, UK. Kevin.Gough@nottingham.ac.uk.ORCID 0000-0001-5211-2088

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Peptide phage display has historically been used to epitope map monoclonal antibodies. More recently, by coupling this method with next-generation sequencing (so-called next-generation phage display, NGPD) to mass screen peptide binding events, the methodology has been successfully applied to map polyclonal antibody responses to infection. This leads to the identification of panels of mimotopes that represent the pathogen's epitopes. One potential advantage of using such an approach is that the mimotopes can represent not just linear epitopes but also conformational epitopes or those produced from post-translational modifications of proteins or from other non-protein macromolecules. The mapping of such complex immunological recognition of a pathogen can inform novel serological assay development and vaccine design. Here, we provide detailed methods for the application of NGPD to identify panels of mimotopes that are recognized specifically by antibodies from individuals with a particular infection.

Indexed as

Antibody FormationBacteriophagesAntibodies, MonoclonalCell Surface Display TechniquesEpitopesHumansAntibodies, MonoclonalEpitopesAntibodyBioinformatic analysisBiopanningEpitope mappingNext generation sequencingPeptide ELISAPhage display

Identifiers

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.