Evidence map›Paper›PMID 37676384›Full record

ArticleStress biology2022

Metabolic signatures of Arabidopsis thaliana abiotic stress responses elucidate patterns in stress priming, acclimation, and recovery.

Yuan Xu, Dana M Freund, Adrian D Hegeman, Jerry D Cohen

Open access · diamondAbstract read
In one paragraph

Article in Stress biology, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 14 papers.

0numbers the graph read from it
0cells of the map it votes in
14citing papers in PubMed
8.4field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

14 citing papers in PubMed, 40 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Article
  6. Mechanisms of Aluminum Toxicity Impacting Root Growth in Shatian Pomelo.International journal of molecular sciences · 2024
    Article
  7. Review
  8. Elevated Temperature Effects on Protein Turnover Dynamics inInternational journal of molecular sciences · 2024
    Article
  9. Review
  10. Review
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  12. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 1 institution in 1 country.

Yuan XuDepartment of Horticultural Science and the Microbial and Plant Genomics Institute, University of Minnesota, MN, Saint Paul, USA.ORCID https://orcid.org/0000-0002-8259-2315
Dana M FreundDepartment of Horticultural Science and the Microbial and Plant Genomics Institute, University of Minnesota, MN, Saint Paul, USA.ORCID https://orcid.org/0000-0001-8371-9894
Adrian D HegemanDepartment of Horticultural Science and the Microbial and Plant Genomics Institute, University of Minnesota, MN, Saint Paul, USA. hegem007@umn.edu.ORCID http://orcid.org/0000-0003-1008-6066
Jerry D CohenDepartment of Horticultural Science and the Microbial and Plant Genomics Institute, University of Minnesota, MN, Saint Paul, USA.ORCID https://orcid.org/0000-0003-2816-8676
University of Minnesota · US

Funding

Directorate for Biological Sciences IOS-1238812Directorate for Biological Sciences IOS-1400818
6 · The paper itself

Abstract

Temperature, water, and light are three abiotic stress factors that have major influences on plant growth, development, and reproduction. Plants can be primed by a prior mild stress to enhance their resistance to future stress. We used an untargeted metabolomics approach to examine Arabidopsis thaliana 11-day-old seedling's abiotic stress responses including heat (with and without priming), cold (with and without priming), water-deficit and high-light before and after a 2-day-recovery period. Analysis of the physiological phenotypes showed that seedlings with stress treatment resulted in a reduction in fresh weight, hypocotyl and root length but remained viable. Several stress responsive metabolites were identified, confirmed with reference standards, quantified, and clustered. We identified shared and specific stress signatures for cold, heat, water-deficit, and high-light treatments. Central metabolism including amino acid metabolism, sugar metabolism, glycolysis, TCA cycle, GABA shunt, glutathione metabolism, purine metabolism, and urea cycle were found to undergo changes that are fundamentally different, although some shared commonalities in response to different treatments. Large increases in cysteine abundance and decreases in reduced glutathione were observed following multiple stress treatments highlighting the importance of oxidative stress as a general phenomenon in abiotic stress. Large fold increases in low-turnover amino acids and maltose demonstrate the critical role of protein and starch autolysis in early abiotic stress responses.

Indexed as

Abiotic stressArabidopsis thalianaLC-HRMSMetabolomicsPlant stress acclimationPrimingRecovery

Identifiers

PMID37676384
PMCPMC10441859
OpenAlexW4212824206

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.