Evidence map›Paper›PMID 37676322›Full record

ArticleArchives of virology2023

Identification and molecular characterization of a novel member of the genus Totivirus from Areca catechu L.

Hang Tan, Ruibai Zhao, Hongxing Wang, Xi Huang

Abstract read
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In one paragraph

Article in Archives of virology, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
1.2field-weighted citation impact, top 22% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 4 citations in OpenAlex.

  1. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 1 institution in 1 country.

Hang TanCollege of Tropical Agriculture and Forest, Sanya Nanfan Research Institute of Hainan University, Sanya, 572025, China.
Ruibai ZhaoCollege of Tropical Agriculture and Forest, Sanya Nanfan Research Institute of Hainan University, Sanya, 572025, China.
Hongxing WangCollege of Tropical Agriculture and Forest, Sanya Nanfan Research Institute of Hainan University, Sanya, 572025, China.
Xi HuangCollege of Tropical Agriculture and Forest, Sanya Nanfan Research Institute of Hainan University, Sanya, 572025, China. xihuang@hainanu.edu.cn.ORCID http://orcid.org/0000-0002-3605-2692
Hainan University · CN

Funding

Hainan Agriculture Research System HNARS-1-G4-1Sanya Yazhou Bay Science and Technology City SCKJ-JYRC-2022-71
6 · The paper itself

Abstract

In previous work, RNA-seq was applied to identify the causal agent of yellow leaf disease (YLD) in areca palm (Areca catechu L.), resulting in the identification of areca palm velarivirus 1 (APV1) associated with YLD. Additionally, RNA-seq revealed a totivirus-like virus in areca palm. This work revealed that the totivirus-like virus is prevalent in asymptomatic areca palms. Therefore, it was tentatively named "areca palm latent totivirus 1" (APLTV1). The complete genome sequence of APLTV1 was determined and found to be 4754 base pairs (bp) in length, containing two ORFs whose encoded proteins share 55% and 69% amino acid (aa) sequence identity with the capsid protein (CP) and RNA-dependent RNA polymerase (RdRp), respectively, of Bursera graveolens-associated totivirus 1 (BgAT1). Phylogenetic analysis based on alignment of the CP and RdRp sequences revealed that APLTV1 clustered with other members of the genus Totivirus, suggesting that APLTV1 represents a novel species of the genus Totivirus, family Totiviridae.

Indexed as

CatechinTotiviridaeTotivirusArecaCapsid ProteinsPhylogenyRNA-Dependent RNA PolymeraseCapsid ProteinsCatechinRNA-Dependent RNA Polymerase

Identifiers

PMID37676322
OpenAlexW4386498790

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.