Evidence map›Paper›PMID 37673661›Full record

ReviewProceedings of the Japan Academy. Series B, Physical and biological sciences2023

Recent methodological advances towards single-cell proteomics.

Sooyeon Kim, Latiefa Kamarulzaman, Yuichi Taniguchi

Abstract readReview
In one paragraph

Review in Proceedings of the Japan Academy. Series B, Physical and biological sciences, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed.

  1. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors.

Sooyeon KimLaboratory for Cell Systems Control, Center for Biosystems Dynamics Research, RIKEN.ORCID http://orcid.org/0000-0001-6884-307X
Latiefa KamarulzamanLaboratory for Cell Systems Control, Center for Biosystems Dynamics Research, RIKEN.ORCID http://orcid.org/0009-0007-2101-6350
Yuichi TaniguchiLaboratory for Cell Systems Control, Center for Biosystems Dynamics Research, RIKEN.ORCID http://orcid.org/0000-0001-5677-8901

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Studying the central dogma at the single-cell level has gained increasing attention to reveal hidden cell lineages and functions that cannot be studied using traditional bulk analyses. Nonetheless, most single-cell studies exploiting genomic and transcriptomic levels fail to address information on proteins that are central to many important biological processes. Single-cell proteomics enables understanding of the functional status of individual cells and is particularly crucial when the specimen is composed of heterogeneous entities of cells. With the growing importance of this field, significant methodological advancements have emerged recently. These include miniaturized and automated sample preparation, multi-omics analyses, and combined analyses of multiple techniques such as mass spectrometry and microscopy. Moreover, artificial intelligence and single-molecule detection technologies have advanced throughput and improved sensitivity limitations, respectively, over conventional methods. In this review, we summarize cutting-edge methodologies for single-cell proteomics and relevant emerging technologies that have been reported in the last 5 years, and provide an outlook on this research field.

Indexed as

Artificial IntelligenceProteomicsGenomicsMetabolomicsTranscriptomeproteomicssingle-cell analysissingle-cell omicssingle-molecule microscopy

Identifiers

PMID37673661
PMCPMC10749393

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.