Evidence map›Paper›PMID 37672538›Full record

ArticlePloS one2023

Microfluidic delivery of cutting enzymes for fragmentation of surface-adsorbed DNA molecules.

Julia Budassi, NaHyun Cho, Anthony Del Valle, Jonathan Sokolov

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact, top 89% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed, 0 citations in OpenAlex.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 1 institution in 1 country.

Julia BudassiDepartment of Materials Science and Chemical Engineering, Stony Brook University, Stony Brook, New York, United States of America.
NaHyun ChoDepartment of Materials Science and Chemical Engineering, Stony Brook University, Stony Brook, New York, United States of America.
Anthony Del ValleDepartment of Physics and Astronomy, Stony Brook University, Stony Brook, New York, United States of America.ORCID 0000-0003-1343-6391
Jonathan SokolovDepartment of Materials Science and Chemical Engineering, Stony Brook University, Stony Brook, New York, United States of America.ORCID 0000-0002-1069-7150
Stony Brook University · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

We describe a method for fragmenting, in-situ, surface-adsorbed and immobilized DNAs on polymethylmethacrylate(PMMA)-coated silicon substrates using microfluidic delivery of the cutting enzyme DNase I. Soft lithography is used to produce silicone elastomer (Sylgard 184) gratings which form microfluidic channels for delivery of the enzyme. Bovine serum albumin (BSA) is used to reduce DNase I adsorption to the walls of the microchannels and enable diffusion of the cutting enzyme to a distance of 10mm. Due to the DNAs being immobilized, the fragment order is maintained on the surface. Possible methods of preserving the order for application to sequencing are discussed.

Indexed as

DNAMicrofluidicsAdsorptionDeoxyribonuclease IDiffusionDeoxyribonuclease IDNA

Identifiers

PMID37672538
PMCPMC10482287
OpenAlexW4386492775

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.