Evidence map›Paper›PMID 37672070›Full record

ArticleApplied microbiology and biotechnology2023

An enhanced activity and thermostability of chimeric Bst DNA polymerase for isothermal amplification applications.

Jiaxuan Li, Yang Li, Yanmei Li, Yi Ma, Wei Xu, Jufang Wang

Abstract read
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In one paragraph

Article in Applied microbiology and biotechnology, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
1.8field-weighted citation impact, top 16% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 16 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 1 country.

Jiaxuan LiSchool of Biology and Biological Engineering, South China University of Technology, Guangzhou, 510006, China.
Yang LiSchool of Biology and Biological Engineering, South China University of Technology, Guangzhou, 510006, China.
Yanmei LiSchool of Biology and Biological Engineering, South China University of Technology, Guangzhou, 510006, China.
Yi MaSchool of Biology and Biological Engineering, South China University of Technology, Guangzhou, 510006, China.
Wei XuGuangdong Provincial Key Laboratory of New Drug Screening, School of Pharmaceutical Sciences, Southern Medical University, Guangzhou, 510515, China. xuwei3322@smu.edu.cn.ORCID http://orcid.org/0000-0002-3135-5010
Jufang WangSchool of Biology and Biological Engineering, South China University of Technology, Guangzhou, 510006, China. jufwang@scut.edu.cn.ORCID http://orcid.org/0000-0002-9908-1001
South China University of Technology · CNGuangdong Pharmaceutical University · CN

Funding

National Natural Science Foundation of China 82173865Science and Technology Program of Guangzhou 202205110007Shenzhen Key Laboratory on Power Battery Safety Research SZBL2021080601010
6 · The paper itself

Abstract

Loop-mediated isothermal amplification (LAMP) is a widely used method for clinical diagnosis, customs quarantine, and disease prevention. However, the low catalytic activity of Bst DNA polymerase has made it challenging to develop rapid and reliable point-of-care testing. Herein, we developed a series of Bst DNA polymerase mutants with enhanced activity by predicting and analyzing the activity sites. Among these mutants, single mutants K431D and K431E showed a 1.93- and 2.03-fold increase in catalytic efficiency, respectively. We also created a chimeric protein by fusing the DNA-binding domain of DNA ligase from Pyrococcus abyssi (DBD), namely DBD-K431E, which enabled real-time LAMP at high temperatures up to 73 ℃ and remained active after heating at 70 ℃ for 8 h. The chimeric DBD-K431E remained active in the presence of 50 U/mL heparin, 10% ethanol, and up to 100 mM NaCl, and showed higher activity in 110 mM (NH

Indexed as

DNA-Directed DNA PolymeraseMolecular Diagnostic TechniquesNucleic Acid Amplification TechniquesDNA LigasesEnzyme StabilityPyrococcus abyssiRecombinant Fusion ProteinsSalmonella typhimuriumTemperatureDNA-Directed DNA PolymeraseDNA LigasesRecombinant Fusion ProteinsBst DNA polymeraseChimeric enzymeLoop-mediated isothermal amplification (LAMP)Salmonella typhimurium detectionSite-directed mutagenesisThermostability

Identifiers

PMID37672070
OpenAlexW4386467501

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.