Evidence map›Paper›PMID 37669874›Full record

ArticleGenes & development2023

Manipulating PTPRD function with ectodomain antibodies.

Zhe Qian, Dongyan Song, Jonathan J Ipsaro, Carmelita Bautista, Leemor Joshua-Tor, Johannes T-H Yeh, Nicholas K Tonks

Open access · diamondAbstract read
In one paragraph

Article in Genes & development, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 10 citations in OpenAlex.

  1. Review
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  5. Review
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4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

7 authors at 2 institutions in 1 country.

Zhe QianCold Spring Harbor Laboratory, Cold Spring Harbor, New York 11724, USA.ORCID 0000-0002-2122-325X
Dongyan SongCold Spring Harbor Laboratory, Cold Spring Harbor, New York 11724, USA.ORCID 0000-0001-5076-4840
Jonathan J IpsaroHoward Hughes Medical Institute, W.M. Keck Structural Biology Laboratory, Cold Spring Harbor Laboratory, Cold Spring Harbor, New York 11724, USA.ORCID 0000-0002-2743-3776
Carmelita BautistaCold Spring Harbor Laboratory, Cold Spring Harbor, New York 11724, USA.
Leemor Joshua-TorHoward Hughes Medical Institute, W.M. Keck Structural Biology Laboratory, Cold Spring Harbor Laboratory, Cold Spring Harbor, New York 11724, USA.ORCID 0000-0001-8185-8049
Johannes T-H YehCold Spring Harbor Laboratory, Cold Spring Harbor, New York 11724, USA.
Nicholas K TonksCold Spring Harbor Laboratory, Cold Spring Harbor, New York 11724, USA; tonks@cshl.edu.
Cold Spring Harbor Laboratory · USHoward Hughes Medical Institute · US

Funding

Single-Cell Biology Shared ResourceP30CA045508 · NCI · COLD SPRING HARBOR LABORATORY · PI David A Tuveson · 1987 to 2026
$118.9M
PROTEIN TYROSINE DEPHOSPHORYLATION &SIGNAL TRANSDUCTIONR01CA053840 · NCI · COLD SPRING HARBOR LABORATORY · PI TONKS, NICHOLAS K · 1991 to 2025
$11.8M
Protein Tyrosine Dephosphorylation &signal TransductionR37CA053840 · NCI · COLD SPRING HARBOR LABORATORY · PI TONKS, NICHOLAS K · 2001 to 2008
$5.2M
Receptor PTPs, Cell Contact and Signal TransductionR01DK124907 · NIDDK · COLD SPRING HARBOR LABORATORY · PI TONKS, NICHOLAS K · 2020 to 2023
$1.9M
Howard Hughes Medical InstituteNCI NIH HHS P30 CA045508NCI NIH HHS R01 CA053840NCI NIH HHS R37 CA053840NIDDK NIH HHS R01 DK124907
6 · The paper itself

Abstract

Protein tyrosine phosphatases (PTPs) are critical regulators of signal transduction but have yet to be exploited fully for drug development. Receptor protein tyrosine phosphatase δ (RPTPδ/PTPRD) has been shown to elicit tumor-promoting functions, including elevating SRC activity and promoting metastasis in certain cell contexts. Dimerization has been implicated in the inhibition of receptor protein tyrosine phosphatases (RPTPs). We have generated antibodies targeting PTPRD ectodomains with the goal of manipulating their dimerization status ectopically, thereby regulating intracellular signaling. We have validated antibody binding to endogenous PTPRD in a metastatic breast cancer cell line, CAL51, and demonstrated that a monoclonal antibody, RD-43, inhibited phosphatase activity and induced the degradation of PTPRD. Similar effects were observed following chemically induced dimerization of its phosphatase domain. Mechanistically, RD-43 triggered the formation of PTPRD dimers in which the phosphatase activity was impaired. Subsequently, the mAb-PTPRD dimer complex was degraded through lysosomal and proteasomal pathways, independently of secretase cleavage. Consequently, treatment with RD-43 inhibited SRC signaling and suppressed PTPRD-dependent cell invasion. Together, these findings demonstrate that manipulating RPTP function via antibodies to the extracellular segments has therapeutic potential.

Indexed as

Receptor-Like Protein Tyrosine Phosphatases, Class 2Signal TransductionCell LineDimerizationPhosphoric Monoester HydrolasesPhosphoric Monoester HydrolasesReceptor-Like Protein Tyrosine Phosphatases, Class 2bivalent antibodydimerizationprotein tyrosine phosphorylationPTPRDreceptor protein tyrosine phosphataseSRC

Identifiers

PMID37669874
PMCPMC10546974
OpenAlexW4386447639

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.