Evidence map›Paper›PMID 37669386›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2023

TET3-mediated DNA oxidation is essential for intestinal epithelial cell response to stressors.

Edward A Gonzalez, Yue Liu, Dahui Wang, Maciej Jeziorek, Sheila Bandyopadhyay, Anjana Rao, Nan Gao, Jean-Pierre Etchegaray

Open access · greenAbstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed
2.6field-weighted citation impact, top 10% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

13 citing papers in PubMed, 17 citations in OpenAlex.

  1. Article
  2. Review
  3. Intrinsic regulation of intestinal stem cell fate and homeostasis by Tet.bioRxiv : the preprint server for biology · 2026
    Article
  4. Article
  5. TET1 deficiency amplifies macrophage inflammatory signaling associated with Crohn's disease.Inflammation research : official journal of the European Histamine Research Society ... [et al.] · 2026
    Article
  6. Article
  7. Article
  8. Article
  9. Article
  10. Article
  11. Article
  12. Article
  13. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 2 institutions in 1 country.

Edward A Gonzalez *Department of Biological Sciences, Rutgers University-Newark, Newark, NJ 07102.ORCID 0000-0002-3600-7509
Yue Liu *Department of Biological Sciences, Rutgers University-Newark, Newark, NJ 07102.
Dahui Wang *Department of Biological Sciences, Rutgers University-Newark, Newark, NJ 07102.ORCID 0009-0002-4345-104X
Maciej JeziorekDepartment of Biological Sciences, Rutgers University-Newark, Newark, NJ 07102.ORCID 0009-0006-6214-1740
Sheila BandyopadhyayDepartment of Biological Sciences, Rutgers University-Newark, Newark, NJ 07102.
Anjana RaoDivision of Signaling and Gene Expression, La Jolla Institute for Immunology, La Jolla, CA 92037.ORCID 0000-0002-1870-1775
Nan GaoDepartment of Biological Sciences, Rutgers University-Newark, Newark, NJ 07102.ORCID 0000-0003-4264-7438
Jean-Pierre EtchegarayDepartment of Biological Sciences, Rutgers University-Newark, Newark, NJ 07102.
Rutgers, The State University of New Jersey · USLa Jolla Institute for Immunology · US

Funding

The TET-DNMT-ASXL1-OGT axis: relevance to clonal hematopoiesis, heterochromatin integrity and cancerR35CA210043 · NCI · LA JOLLA INSTITUTE FOR IMMUNOLOGY · PI Anjana Rao · 2016 to 2026
$10.6M
Graduate Research Training Initiative for Student Enhancement (G-RISE) (T32) at Rutgers University-NewarkT32GM140951 · NIGMS · RUTGERS THE STATE UNIV OF NJ NEWARK · PI DELGADO, MAURICIO R., KOMISARUK, BARRY RICHARD · 2021 to 2025
$2.5M
Paneth cell heterogeneity in infection and inflammationR01DK132885 · NIDDK · RUTGERS THE STATE UNIV OF NJ NEWARK · PI Nan Gao · 2022 to 2026
$2.4M
Research Supplements to Promote Diversity in Health-Related ResearchR01DK119198 · NIDDK · RUTGERS THE STATE UNIV OF NJ NEWARK · PI GAO, NAN, KIELA, PAWEL R · 2019 to 2023
$1.9M
Mucosal modulation by LGG and R. gnavus specific tryptophan metabolitesR01AT010243 · NCCIH · RUTGERS THE STATE UNIV OF NJ NEWARK · PI FERRARIS, RONALDO PARAOAN, GAO, NAN · 2018 to 2021
$1.6M
TET-mediated DNA oxidations in mucosal innate defenseR21AI167079 · NIAID · RUTGERS THE STATE UNIV OF NJ NEWARK · PI ETCHEGARAY, JEAN-PIERRE, GAO, NAN · 2022 to 2023
$432k
NCCIH NIH HHS R01 AT010243NCI NIH HHS R35 CA210043NIAID NIH HHS R21 AI167079NIDDK NIH HHS R01 DK119198NIDDK NIH HHS R01 DK132885NIGMS NIH HHS T32 GM140951
6 · The paper itself

Abstract

DNA methylation functions as a repressive epigenetic mark that can be reversed by the Ten-eleven translocation (TET) family of DNA dioxygenases that sequentially oxidize 5-methylcytosine into 5-hydroxymethylcytosine (5hmC), 5-formylcytosine (5fC), and 5-carboxylcytosine (5caC). Both 5fC and 5caC can be excised by DNA base-excision repair factors leading to unmodified cytosines. TET enzymes were recently implicated as potential risk factors for inflammatory bowel disease (IBD), but the contribution of TET-mediated DNA oxidation to intestinal homeostasis and response to environmental stressors are unknown. Here, we show prominent roles of TET3 in regulating mouse intestinal epithelial differentiation and response to luminal stressors. Compared with wild-type littermates, mice with intestinal epithelial cell-specific ablation of

Indexed as

ColitisDioxygenasesAnimalsDNAEnterocytesHumansMiceOxidation-ReductionPaneth CellsDioxygenasesDNATET3 protein, humanTet3 protein, mousecell biologyepigeneticimmunologyinflammationintestinal epithelia

Identifiers

PMID37669386
PMCPMC10500271
OpenAlexW4386453186

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.