Evidence map›Paper›PMID 37668712›Full record

ArticleAmino acids2023

PepAnalyzer: predicting peptide properties using its sequence.

Vanshika Rustagi, Shradheya R R Gupta, Monika Bajaj, Archana Singh, Indrakant Kumar Singh

Abstract read
PubMed Publisher
In one paragraph

Article in Amino acids, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
1.1field-weighted citation impact, top 22% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 7 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 1 institution in 1 country.

Vanshika RustagiMolecular Biology Research Lab., Department of Zoology, Deshbandhu College, University of Delhi, Kalkaji, New Delhi, 110019, India.
Shradheya R R GuptaMolecular Biology Research Lab., Department of Zoology, Deshbandhu College, University of Delhi, Kalkaji, New Delhi, 110019, India.
Monika BajajDepartment of Computer Science, Deshbandhu College, University of Delhi, Kalkaji, New Delhi, 110019, India.
Archana SinghDepartment of Botany, Hansraj College, University of Delhi, Delhi, 110007, India. achanasingh@hrc.du.ac.in.
Indrakant Kumar SinghMolecular Biology Research Lab., Department of Zoology, Deshbandhu College, University of Delhi, Kalkaji, New Delhi, 110019, India. iksingh@db.du.ac.in.
University of Delhi · IN

Funding

Indian Council of Medical Research Grant No.33/10/2019-TF/Rare/BMS & ISRM/12(58)/2020 ID No.2020-1353Indian Council of Medical Research JRF
6 · The paper itself

Abstract

Peptides are short linear molecules consisting of amino acids that play an essential role in most biological processes. They can treat diseases by working as a vaccine or antimicrobial agent and serves as a cancer molecule to deliver the drug to the target site for the treatment of cancer. They have the potential to solve the drawbacks of current medications and can be industrially produced in large quantities at low cost. However, poor chemical and physical stability, short circulating plasma half-life, and solubility are some issues that need solutions before they can be used as therapeutics. PepAnalyzer tool is a user-friendly tool that predicts 15 different properties such as binding potential, half-life, transmembrane patterns, test tube stability, charge, isoelectric point, molecular weights, and molar extinction coefficients only using the sequence. The tool is designed using BioPython utility and has even results with standard tools, such as Expasy, EBI, Genecorner, and Geneinfinity. The tool assists students, researchers, and the pharmaceutical sector. The PepAnalyzer tool's online platform is accessible at the link: http://www.iksmbrlabdu.in/peptool .

Indexed as

Anti-Infective AgentsPeptidesAmino AcidsHumansIsoelectric PointMolecular WeightAmino AcidsAnti-Infective AgentsPeptidesBinding potentialBLASTHydropathy plotIsoelectric pointMolecular weightPepAnalyzerPeptidePrediction

Identifiers

PMID37668712
OpenAlexW4386438440

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.