Evidence map›Paper›PMID 37666637›Full record

ArticleMethods in enzymology2023

Expression, purification, crystallization of a ZIP metal transporter from Bordetella bronchiseptica (BbZIP).

Yao Zhang, Dexin Sui, Jian Hu

Open access · greenAbstract read
In one paragraph

Article in Methods in enzymology, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact, top 79% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed, 0 citations in OpenAlex.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 1 institution in 1 country.

Yao ZhangDepartment of Biochemistry and Molecular Biology, Michigan State University, East Lansing, MI, United States.
Dexin SuiDepartment of Biochemistry and Molecular Biology, Michigan State University, East Lansing, MI, United States.
Jian HuDepartment of Biochemistry and Molecular Biology, Michigan State University, East Lansing, MI, United States; Department of Chemistry, Michigan State University, East Lansing, MI, United States. Electronic address: hujian1@msu.edu.
Michigan State University · US

Funding

Transport, substrate specificity and regulation mechanisms of the ZIP transition metal transportersR35GM140931 · NIGMS · MICHIGAN STATE UNIVERSITY · PI HU, JIAN · 2021 to 2025
$1.7M
Zinc enrichment/zinc sensing mechanism through the extracellular domain of ZIP4R01GM115373 · NIGMS · MICHIGAN STATE UNIVERSITY · PI HU, JIAN · 2015 to 2019
$1.5M
Structural and Mechanistic Characterization of the ZIP Metal TransportersR01GM129004 · NIGMS · MICHIGAN STATE UNIVERSITY · PI HU, JIAN · 2018 to 2020
$593k
NIGMS NIH HHS R01 GM115373NIGMS NIH HHS R01 GM129004NIGMS NIH HHS R35 GM140931
6 · The paper itself

Abstract

Structural studies of the ZIPs have greatly improved the understanding of the working mechanism for this functionally important metal transporter family. In this chapter, we describe the procedures to overexpress, purify, and crystallize a representative bacterial ZIP from Bordetella bronchiseptica (BbZIP), the structure of which was the first one that revealed the common structural framework of the transmembrane domain conserved within the entire ZIP family. We also discuss the considerations when we designed these experiments and compare the approaches used in this study with those commonly used in other works. The protocols provided in this chapter will facilitate structural and biochemical studies of other members of the ZIP family.

Indexed as

Bordetella bronchisepticaCrystallizationMembrane Transport ProteinsMetalsProtein DomainsMembrane Transport ProteinsMetalsAutoinductionBbZIPCrystallizationDiffractionLipidic cubic phase (LCP)OverexpressionPurification

Identifiers

PMID37666637
PMCPMC10999279
OpenAlexW4381747238

What OpenQuestion holds

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LicenceTDM
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.