Evidence map›Paper›PMID 37665979›Full record

ArticlePlant physiology2023

Oryza glumaepatula: A wild relative to improve drought tolerance in cultivated rice.

Parthiban Thathapalli Prakash, Dmytro Chebotarov, Jianwei Zhang, David A Kudrna, Rolando O Torres, Mignon A Natividad, Marinell R Quintana, Jiaming Song, Carlos E Maldonado, Sherry Lou Hechanova and 3 more

Open access · hybridAbstract read
In one paragraph

Article in Plant physiology, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
2.4field-weighted citation impact, top 11% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 6 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors at 3 institutions in 5 countries.

Parthiban Thathapalli PrakashRice Breeding Innovations Department, International Rice Research Institute, UPLB Campus, Los Baños, Laguna 4031, Philippines.ORCID 0000-0002-4539-140X
Dmytro ChebotarovRice Breeding Innovations Department, International Rice Research Institute, UPLB Campus, Los Baños, Laguna 4031, Philippines.ORCID 0000-0003-1351-9453
Jianwei ZhangArizona Genomics Institute, School of Plant Sciences, University of Arizona, Tucson, AZ 85721, USA.ORCID 0000-0001-8030-5346
David A KudrnaArizona Genomics Institute, School of Plant Sciences, University of Arizona, Tucson, AZ 85721, USA.ORCID 0000-0002-3092-3629
Rolando O TorresRice Breeding Innovations Department, International Rice Research Institute, UPLB Campus, Los Baños, Laguna 4031, Philippines.ORCID 0000-0002-9294-2729
Mignon A NatividadRice Breeding Innovations Department, International Rice Research Institute, UPLB Campus, Los Baños, Laguna 4031, Philippines.ORCID 0000-0002-4007-8035
Marinell R QuintanaRice Breeding Innovations Department, International Rice Research Institute, UPLB Campus, Los Baños, Laguna 4031, Philippines.ORCID 0000-0002-3308-1906
Jiaming SongArizona Genomics Institute, School of Plant Sciences, University of Arizona, Tucson, AZ 85721, USA.ORCID 0000-0002-6636-4152
Carlos E MaldonadoArizona Genomics Institute, School of Plant Sciences, University of Arizona, Tucson, AZ 85721, USA.ORCID 0000-0001-9433-6979
Sherry Lou HechanovaRice Breeding Innovations Department, International Rice Research Institute, UPLB Campus, Los Baños, Laguna 4031, Philippines.ORCID 0009-0001-8450-768X
Kshirod JenaRice Breeding Innovations Department, International Rice Research Institute, UPLB Campus, Los Baños, Laguna 4031, Philippines.ORCID 0000-0003-1377-4040
Rod A WingArizona Genomics Institute, School of Plant Sciences, University of Arizona, Tucson, AZ 85721, USA.ORCID 0000-0001-6633-6226
Amelia HenryRice Breeding Innovations Department, International Rice Research Institute, UPLB Campus, Los Baños, Laguna 4031, Philippines.ORCID 0000-0001-6255-5480
International Rice Research Institute · PHUniversity of Arizona · USUniversity of Illinois Urbana-Champaign · US

Funding

AXA Chair in Genome Biology and Evolutionary GenomicsBud Antle Endowed Chair of Excellence in Agriculture & Life Sciences
6 · The paper itself

Abstract

Developing drought-resistant rice (Oryza sativa, L.) is essential for improving field productivity, especially in rain-fed areas affected by climate change. Wild relatives of rice are potential sources for drought-resistant traits. Therefore, we compared root growth and drought response among 22 wild Oryza species, from which Oryza glumaepatula was selected as a promising source for further exploration. A geographically diverse panel of 69 O. glumaepatula accessions was then screened for drought stress-related traits, and 6 of these accessions showed lower shoot dry weight (SDW) reduction, greater percentage of deep roots, and lower stomatal density (STO) under drought than the drought tolerant O. sativa variety, Sahbhagi dhan. Based on whole-genome resequencing of all 69 O. glumaepatula accessions and variant calling to a high-quality O. glumaepatula reference genome, we detected multiple genomic loci colocating for SDW, root dry weight at 30 to 45 cm depth, and STO in consecutive drought trials. Geo-referencing indicated that the potential drought donors originated in flood-prone locations, corroborating previous hypotheses about the coexistence of flood and drought tolerance within individual Oryza genomes. These findings present potential donor accessions, traits, and genomic loci from an AA genome wild relative of rice that, together with the recently developed reference genome, may be useful for further introgression of drought tolerance into the O. sativa backgrounds.

Indexed as

OryzaDrought ResistanceDroughtsGenome, PlantPhenotype

Identifiers

PMID37665979
PMCPMC10663109
OpenAlexW4386413907

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.