Evidence map›Paper›PMID 37665017›Full record

ArticleNucleic acids research2024

Open Genes-a new comprehensive database of human genes associated with aging and longevity.

Ekaterina Rafikova, Nikolay Nemirovich-Danchenko, Anna Ogmen, Anna Parfenenkova, Anastasiia Velikanova, Stanislav Tikhonov, Leonid Peshkin, Konstantin Rafikov, Olga Spiridonova, Yulia Belova and 3 more

Abstract read
In one paragraph

Article in Nucleic acids research, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 19 papers.

0numbers the graph read from it
0cells of the map it votes in
19citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

19 citing papers in PubMed.

  1. Article
  2. Article
  3. Evolutionary genetics of ageing.Nature reviews. Genetics · 2026
    Review
  4. Article
  5. Article
  6. Article
  7. Food science & nutrition · 2026
    Article
  8. The aging genome exhibits organized vulnerability to somatic mutations.bioRxiv : the preprint server for biology · 2026
    Article
  9. Small-molecule IGF1R inhibitors extend healthspan in a mouse model.bioRxiv : the preprint server for biology · 2026
    Article
  10. Article
  11. Article
  12. Article
  13. Article
  14. Article
  15. Article
  16. Article
  17. Review
  18. Article
  19. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors.

Ekaterina RafikovaOpen Longevity, 15260 Ventura Blvd, STE 2230, Sherman Oaks, CA 91403, USA.ORCID 0000-0003-2905-4021
Nikolay Nemirovich-DanchenkoOpen Longevity, 15260 Ventura Blvd, STE 2230, Sherman Oaks, CA 91403, USA.
Anna OgmenOpen Longevity, 15260 Ventura Blvd, STE 2230, Sherman Oaks, CA 91403, USA.
Anna ParfenenkovaOpen Longevity, 15260 Ventura Blvd, STE 2230, Sherman Oaks, CA 91403, USA.
Anastasiia VelikanovaOpen Longevity, 15260 Ventura Blvd, STE 2230, Sherman Oaks, CA 91403, USA.
Stanislav TikhonovFaculty of Bioengineering and Bioinformatics, Moscow State University, Moscow 119991, Russia.
Leonid PeshkinDepartment of Systems Biology, Harvard Medical School, Boston, MA 02115, USA.ORCID 0000-0002-6420-848X
Konstantin RafikovOpen Longevity, 15260 Ventura Blvd, STE 2230, Sherman Oaks, CA 91403, USA.
Olga SpiridonovaOpen Longevity, 15260 Ventura Blvd, STE 2230, Sherman Oaks, CA 91403, USA.
Yulia BelovaOpen Longevity, 15260 Ventura Blvd, STE 2230, Sherman Oaks, CA 91403, USA.
Timofey GlininOpen Longevity, 15260 Ventura Blvd, STE 2230, Sherman Oaks, CA 91403, USA.ORCID 0000-0003-0550-741X
Anastasia EgorovaOpen Longevity, 15260 Ventura Blvd, STE 2230, Sherman Oaks, CA 91403, USA.
Mikhail BatinOpen Longevity, 15260 Ventura Blvd, STE 2230, Sherman Oaks, CA 91403, USA.

Funding

Reverse Engineering of Cell SenescenceR01AG073341 · NIA · HARVARD MEDICAL SCHOOL · PI MARC Wallace KIRSCHNER · 2022 to 2026
$3.3M
Reverse Engineering of Cell SenescenceR56AG073341 · NIA · HARVARD MEDICAL SCHOOL · PI KIRSCHNER, MARC WALLACE, PESHKIN, LEON · 2021 to 2021
$347k
NIA NIH HHS AG073341NIA NIH HHS R01 AG073341NIA NIH HHS R56 AG073341
6 · The paper itself

Abstract

The Open Genes database was created to enhance and simplify the search for potential aging therapy targets. We collected data on 2402 genes associated with aging and developed convenient tools for searching and comparing gene features. A comprehensive description of genes has been provided, including lifespan-extending interventions, age-related changes, longevity associations, gene evolution, associations with diseases and hallmarks of aging, and functions of gene products. For each experiment, we presented the necessary structured data for evaluating the experiment's quality and interpreting the study's findings. Our goal was to stay objective and precise while connecting a particular gene to human aging. We distinguished six types of studies and 12 criteria for adding genes to our database. Genes were classified according to the confidence level of the link between the gene and aging. All the data collected in a database are provided both by an API and a user interface. The database is publicly available on a website at https://open-genes.org/.

Indexed as

AgingDatabases, GeneticLongevityHumansRNARNA

Identifiers

PMID37665017
PMCPMC10768108

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.