Evidence map›Paper›PMID 37664589›Full record

ArticleiScience2023

Distinctive interactomes of RNA polymerase II phosphorylation during different stages of transcription.

Rosamaria Y Moreno, Kyle J Juetten, Svetlana B Panina, Jamie P Butalewicz, Brendan M Floyd, Mukesh Kumar Venkat Ramani, Edward M Marcotte, Jennifer S Brodbelt, Y Jessie Zhang

Open access · goldAbstract read
In one paragraph

Article in iScience, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
1.4field-weighted citation impact, top 19% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed, 9 citations in OpenAlex.

  1. Article
  2. Review
  3. Article
  4. Review
  5. Article
  6. Review
  7. Article
  8. ThrScience advances · 2024
    Article
  9. Article
  10. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 1 institution in 1 country.

Rosamaria Y MorenoDepartment of Molecular Biosciences, University of Texas, Austin, TX, USA.
Kyle J JuettenDepartment of Chemistry, University of Texas, Austin, TX, USA.
Svetlana B PaninaDepartment of Molecular Biosciences, University of Texas, Austin, TX, USA.
Jamie P ButalewiczDepartment of Chemistry, University of Texas, Austin, TX, USA.
Brendan M FloydDepartment of Molecular Biosciences, University of Texas, Austin, TX, USA.
Mukesh Kumar Venkat RamaniDepartment of Molecular Biosciences, University of Texas, Austin, TX, USA.
Edward M MarcotteDepartment of Molecular Biosciences, University of Texas, Austin, TX, USA.
Jennifer S BrodbeltDepartment of Chemistry, University of Texas, Austin, TX, USA.
Y Jessie ZhangDepartment of Molecular Biosciences, University of Texas, Austin, TX, USA.
The University of Texas at Austin · US

Funding

Proteomics and model organism humanization to decode human geneticsR35GM122480 · NIGMS · UNIVERSITY OF TEXAS AT AUSTIN · PI EDWARD M MARCOTTE · 2017 to 2026
$5.4M
Ultraviolet Photodissociation Mass Spectrometry for Characterization of Biological MoleculesR35GM139658 · NIGMS · UNIVERSITY OF TEXAS AT AUSTIN · PI BRODBELT, JENNIFER S. · 2021 to 2025
$2.9M
Gene-specific transcriptional silencing directed by dephosphorylation of RNAP IIR01GM104896 · NIGMS · UNIVERSITY OF TEXAS AT AUSTIN · PI ZHANG, YAN JESSIE · 2013 to 2022
$2.4M
Deciphering the phosphorylation pattern of RNA polymerase II for eukaryotic transcriptionR35GM148356 · NIGMS · UNIVERSITY OF TEXAS AT AUSTIN · PI Yan Jessie Zhang · 2023 to 2026
$2.3M
NIGMS NIH HHS R01 GM104896NIGMS NIH HHS R35 GM122480NIGMS NIH HHS R35 GM139658NIGMS NIH HHS R35 GM148356
6 · The paper itself

Abstract

During eukaryotic transcription, RNA polymerase II undergoes dynamic post-translational modifications on the C-terminal domain (CTD) of the largest subunit, generating an information-rich PTM landscape that transcriptional regulators bind. The phosphorylation of Ser5 and Ser2 of CTD heptad occurs spatiotemporally with the transcriptional stages, recruiting different transcriptional regulators to Pol II. To delineate the protein interactomes at different transcriptional stages, we reconstructed phosphorylation patterns of the CTD at Ser5 and Ser2

Indexed as

BiochemistryBiological sciencesMolecular biologyMolecular mechanism of gene regulation

Identifiers

PMID37664589
PMCPMC10470302
OpenAlexW4385691792

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.