Evidence map›Paper›PMID 37664240›Full record

ArticleFrontiers in molecular neuroscience2023

Combining RNAscope and immunohistochemistry to visualize inflammatory gene products in neurons and microglia.

Jayson B Ball, Connor J McNulty, Suzanne M Green-Fulgham, Joseph M Dragavon, Igor R Correia Rocha, Maggie R Finch, Emily D Prévost, Imaad I Siddique, Brodie J Woodall, Linda R Watkins and 2 more

Abstract read
In one paragraph

Article in Frontiers in molecular neuroscience, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed.

  1. Article
  2. Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors.

Jayson B BallDepartment of Psychology and Neuroscience, Center for Neuroscience, University of Colorado Boulder, Boulder, CO, United States.
Connor J McNultyDepartment of Psychology and Neuroscience, Center for Neuroscience, University of Colorado Boulder, Boulder, CO, United States.
Suzanne M Green-FulghamDepartment of Psychology and Neuroscience, Center for Neuroscience, University of Colorado Boulder, Boulder, CO, United States.
Joseph M DragavonAdvanced Light Microscopy Core, Biofrontiers Institute, University of Colorado Boulder, Boulder, CO, United States.
Igor R Correia RochaDepartment of Psychology and Neuroscience, Center for Neuroscience, University of Colorado Boulder, Boulder, CO, United States.
Maggie R FinchDepartment of Psychology and Neuroscience, Center for Neuroscience, University of Colorado Boulder, Boulder, CO, United States.
Emily D PrévostDepartment of Psychology and Neuroscience, Center for Neuroscience, University of Colorado Boulder, Boulder, CO, United States.
Imaad I SiddiqueDepartment of Psychology and Neuroscience, Center for Neuroscience, University of Colorado Boulder, Boulder, CO, United States.
Brodie J WoodallDepartment of Psychology and Neuroscience, Center for Neuroscience, University of Colorado Boulder, Boulder, CO, United States.
Linda R WatkinsDepartment of Psychology and Neuroscience, Center for Neuroscience, University of Colorado Boulder, Boulder, CO, United States.
Michael V BarattaDepartment of Psychology and Neuroscience, Center for Neuroscience, University of Colorado Boulder, Boulder, CO, United States.
David H RootDepartment of Psychology and Neuroscience, Center for Neuroscience, University of Colorado Boulder, Boulder, CO, United States.

Funding

Genetic dissection of ventral tegmental area glutamate and GABA neurons in reward and aversionR01DA047443 · NIDA · UNIVERSITY OF COLORADO · PI ROOT, DAVID H · 2020 to 2024
$1.7M
ImageXpress Micro Cellular Imagining and Analysis SystemS10RR026680 · NCRR · UNIVERSITY OF COLORADO · PI LIU, XUEDONG · 2011 to 2011
$380k
NCRR NIH HHS S10 RR026680NIDA NIH HHS R01 DA047443
6 · The paper itself

Abstract

A challenge for central nervous system (CNS) tissue analysis in neuroscience research has been the difficulty to codetect and colocalize gene and protein expression in the same tissue. Given the importance of identifying gene expression relative to proteins of interest, for example, cell-type specific markers, we aimed to develop a protocol to optimize their codetection. RNAscope fluorescent

Indexed as

co-localizationhybridizationImarisinterleukin-1betaneuroinflammationNLRP3ratspinal cord

Identifiers

PMID37664240
PMCPMC10470653

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.