Evidence map›Paper›PMID 37664117›Full record

ArticleFrontiers in microbiology2023

The utilization of nanopore targeted sequencing proves to be advantageous in the identification of infections present in deceased donors.

Zhiyuan Yao, Yu Liu, Liying Zhan, Tao Qiu, Guang Li, Zhongbao Chen, Xiaoyu Fang, Zhou Liu, Wei Wu, Zhaomin Liao and 1 more

Open access · goldAbstract read
In one paragraph

Article in Frontiers in microbiology, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
0.2field-weighted citation impact, top 46% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed, 1 citations in OpenAlex.

  1. Review
  2. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 2 institutions in 1 country.

Zhiyuan YaoDepartment of Critical Care Medicine, Renmin Hospital of Wuhan University, Wuhan, Hubei, China.
Yu LiuDepartment of Cardiology, Renmin Hospital of Wuhan University, Wuhan, Hubei, China.
Liying ZhanDepartment of Critical Care Medicine, Renmin Hospital of Wuhan University, Wuhan, Hubei, China.
Tao QiuDepartment of Organ Transplantation, Renmin Hospital of Wuhan University, Wuhan, Hubei, China.
Guang LiDepartment of Critical Care Medicine, Renmin Hospital of Wuhan University, Wuhan, Hubei, China.
Zhongbao ChenDepartment of Organ Transplantation, Renmin Hospital of Wuhan University, Wuhan, Hubei, China.
Xiaoyu FangDepartment of Critical Care Medicine, Renmin Hospital of Wuhan University, Wuhan, Hubei, China.
Zhou LiuDepartment of Critical Care Medicine, Renmin Hospital of Wuhan University, Wuhan, Hubei, China.
Wei WuDepartment of Critical Care Medicine, Renmin Hospital of Wuhan University, Wuhan, Hubei, China.
Zhaomin LiaoDepartment of Critical Care Medicine, Renmin Hospital of Wuhan University, Wuhan, Hubei, China.
Wenfang XiaDepartment of Critical Care Medicine, Renmin Hospital of Wuhan University, Wuhan, Hubei, China.
Renmin Hospital of Wuhan University · CNWuhan University · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Background: Nanopore Target Sequencing (NTS) represents a novel iteration of gene sequencing technology; however, its potential utility in the detection of infection in deceased donors has yet to be documented. The present study endeavors to assess the applicability of NTS in this domain. Methods: This retrospective study comprised a cohort of 71 patients who were under intensive care at Renmin Hospital of Wuhan University between June 2020 and January 2022. The specimens were subjected to microbiological tests utilizing NTS, culture, and other techniques, and subsequently, the diagnostic accuracy of NTS was compared with conventional methods. Results: Blood NTS exhibited a better agreement rate of 52.11% and a greater positive rate of pathogen detection than blood culture (50.70% vs. 5.63%, Conclusion: The pathogen detection technology NTS has a high sensitivity and positive rate. It can more accurately and earlier detect infection in deceased donors, which could be very important for raising the donation conversion rate.

Indexed as

blood cultureChinese donation after citizen’s deathdeceased donorsnanopore targeted sequencingthird-generation sequencing

Identifiers

PMID37664117
PMCPMC10469296
OpenAlexW4385994614

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.