Evidence map›Paper›PMID 37664114›Full record

ArticleFrontiers in microbiology2023

First identification of canine adenovirus 1 in mink and bioinformatics analysis of its 100 K protein.

Jinyu Hou, Jinfeng Xu, Ben Wang, Hongling Zhang, Baishuang Yin, Goujiang Li, Fashou Lei, Xiaoming Cai, Yanzhu Zhu, Longtao Wang

Open access · goldAbstract read
In one paragraph

Article in Frontiers in microbiology, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
1.9field-weighted citation impact, top 13% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 6 citations in OpenAlex.

  1. Review
  2. Review
  3. Article
  4. Molecular Detection of Viral and Bacterial Pathogens in Red Foxes (Animals : an open access journal from MDPI · 2024
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 3 institutions in 1 country.

Jinyu HouCollege of Veterinary Medicine, Jilin Agricultural University, Changchun, China.
Jinfeng XuAnimal Science and Technology College, Jilin Agriculture Science and Technology College, Jilin, China.
Ben WangAnimal Science and Technology College, Jilin Agriculture Science and Technology College, Jilin, China.
Hongling ZhangAnimal Science and Technology College, Jilin Agriculture Science and Technology College, Jilin, China.
Baishuang YinAnimal Science and Technology College, Jilin Agriculture Science and Technology College, Jilin, China.
Goujiang LiAnimal Science and Technology College, Jilin Agriculture Science and Technology College, Jilin, China.
Fashou LeiAnimal Husbandry and Veterinary Station in Huzhu County of Qinghai Province, Haidong, China.
Xiaoming CaiAnimal Husbandry and Veterinary Station in Huzhu County of Qinghai Province, Haidong, China.
Yanzhu ZhuAnimal Science and Technology College, Jilin Agriculture Science and Technology College, Jilin, China.
Longtao WangCollege of Veterinary Medicine, Jilin Agricultural University, Changchun, China.
Jilin Agricultural Science and Technology University · CNJilin Agricultural University · CNQingdao Institute of Animal Husbandry and Veterinary Medicine · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Introduction: Animal trade favors the spreading of emerging canine adenovirus 1 (CAdV-1) in mink. Because the 100K protein is not exposed to the viral surface at any stage, it can be used to differentiate the vaccine from wild virus infection. However, no related research has been conducted. This study aimed to find evidence of CAdV-1 in mink and predict the character of the 100K protein in the current circulating CAdV-1 strain of mink. Method: In this experiment, the identification of CAdV-1, the phylogenetic tree, homology, and bioinformatics analysis of 100K were conducted. Results: The results showed that the CAdV-1 was identified in the mink and that its Fiber was located in a separate branch. It was closely related to strains isolated from Norwegian Arctic fox and Red fox. 100K was located in a separate branch, which had the closest genetic relationship with skunks, porcupines, raccoons, and hedgehogs and a far genetic relationship with the strains in dogs. 100K protein is an unstable and hydrophobic protein. It had evidence of selective pressure and recombination, 1 glycosylation site, 48 phosphorylation sites, 60 dominant B cell epitopes, and 9 peptides of MHC-I and MHC-II. Its subcellular localization was mainly in the endoplasmic reticulum and mitochondria. The binding sites of 100K proteins were DBP proteins and 33K proteins. Discussion: The stains in the mink were different from fox. The exploration of its genomic characteristics will provide us with a deeper understanding of the prevention of canine adenovirus.

Indexed as

100 K proteinbioinformatics analysisCAdV-1homology analysismink

Identifiers

PMID37664114
PMCPMC10469754
OpenAlexW4385905698

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.