Evidence map›Paper›PMID 37662799›Full record

ArticleHeliyon2023

HUB genes transcriptionally regulate lipid metabolism in alveolar type II cells under LPS stimulation.

Xianjun Chen, Chuan Xiao, Ying Liu, Qing Li, Yumei Cheng, Shuwen Li, Wei Li, Jia Yuan, Ying Wang, Feng Shen

Open access · goldAbstract read
In one paragraph

Article in Heliyon, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
1.8field-weighted citation impact, top 14% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 7 citations in OpenAlex.

  1. Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 1 institution in 1 country.

Xianjun ChenDepartment of Intensive Care Unit, The Affiliated Hospital of Guizhou Medical University, Guiyang, 550004, Guizhou, China.
Chuan XiaoDepartment of Intensive Care Unit, The Affiliated Hospital of Guizhou Medical University, Guiyang, 550004, Guizhou, China.
Ying LiuDepartment of Intensive Care Unit, The Affiliated Hospital of Guizhou Medical University, Guiyang, 550004, Guizhou, China.
Qing LiDepartment of Intensive Care Unit, The Affiliated Hospital of Guizhou Medical University, Guiyang, 550004, Guizhou, China.
Yumei ChengDepartment of Intensive Care Unit, The Affiliated Hospital of Guizhou Medical University, Guiyang, 550004, Guizhou, China.
Shuwen LiDepartment of Intensive Care Unit, The Affiliated Hospital of Guizhou Medical University, Guiyang, 550004, Guizhou, China.
Wei LiDepartment of Intensive Care Unit, The Affiliated Hospital of Guizhou Medical University, Guiyang, 550004, Guizhou, China.
Jia YuanDepartment of Intensive Care Unit, The Affiliated Hospital of Guizhou Medical University, Guiyang, 550004, Guizhou, China.
Ying WangDepartment of Intensive Care Unit, The Affiliated Hospital of Guizhou Medical University, Guiyang, 550004, Guizhou, China.
Feng ShenDepartment of Intensive Care Unit, The Affiliated Hospital of Guizhou Medical University, Guiyang, 550004, Guizhou, China.
Guiyang Medical University · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Objective: Alveolar type II (ATII) cells produce pulmonary surfactant (PS) essential for maintaining lung function. The aberration or depletion of PS can cause alveolar collapse, a hallmark of acute respiratory distress syndrome (ARDS). However, the intricacies underlying these changes remain unclear. This study aimed to elucidate the mechanisms underlying PS perturbations in ATII cells using transcriptional RNA-seq, offering insights into the pathogenesis of ARDS. Methods: ATII cells were identified using immunofluorescence targeting surface-active protein C. We used 24-h lipopolysaccharide (LPS)-induced ATII cells as an ARDS cell model. The efficacy of the injury model was gauged by detecting the presence of tumour necrosis factor-α and interleukin-6. RNA-seq analysis was performed to investigate the dynamics of PS deviation in unaltered and LPS-exposed ATII cells. Results: Whole-transcriptome sequencing revealed that LPS-stimulated ATII cells showed significantly increased transcription of genes, including Lss, Nsdhl, Hmgcs1, Mvd, Cyp51, Idi1, Acss2, Insig1, and Hsd17b7, which play key roles in regulating cholesterol biosynthesis. We further verified gene levels using real-time quantitative PCR, and the results showed that the mRNA expression of these genes increased, which was consistent with the RNA-seq results. Conclusion: Our study revealed pivotal transcriptional shifts in ATII cells after LPS exposure, particularly in nine key lipid and cholesterol metabolism genes. This altered expression might disrupt the lipid balance, ultimately affecting PS function. This finding deepens our understanding of the aetiology of ARDS and may lead to new therapeutic directions.

Indexed as

ARDSATII cellsHub geneLipid metabolismPulmonary surfactantRNA-Seq

Identifiers

PMID37662799
PMCPMC10472236
OpenAlexW4386171937

What OpenQuestion holds

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LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.