Evidence map›Paper›PMID 37662358›Full record

ArticlebioRxiv : the preprint server for biology2023

Active learning of enhancer and silencer regulatory grammar in photoreceptors.

Ryan Z Friedman, Avinash Ramu, Sara Lichtarge, Connie A Myers, David M Granas, Maria Gause, Joseph C Corbo, Barak A Cohen, Michael A White

Open access · greenAbstract readPreprint
In one paragraph

Article in bioRxiv : the preprint server for biology, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed, 10 citations in OpenAlex.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

9 authors at 1 institution in 1 country.

Ryan Z FriedmanThe Edison Family Center for Genome Sciences & Systems Biology, Washington University School of Medicine, Saint Louis, MO, 63110.
Avinash RamuThe Edison Family Center for Genome Sciences & Systems Biology, Washington University School of Medicine, Saint Louis, MO, 63110.
Sara LichtargeThe Edison Family Center for Genome Sciences & Systems Biology, Washington University School of Medicine, Saint Louis, MO, 63110.
Connie A MyersDepartment of Pathology and Immunology, Washington University School of Medicine, Saint Louis, MO, 63110.
David M GranasThe Edison Family Center for Genome Sciences & Systems Biology, Washington University School of Medicine, Saint Louis, MO, 63110.
Maria GauseDepartment of Pathology and Immunology, Washington University School of Medicine, Saint Louis, MO, 63110.
Joseph C CorboDepartment of Pathology and Immunology, Washington University School of Medicine, Saint Louis, MO, 63110.
Barak A CohenThe Edison Family Center for Genome Sciences & Systems Biology, Washington University School of Medicine, Saint Louis, MO, 63110.
Michael A WhiteThe Edison Family Center for Genome Sciences & Systems Biology, Washington University School of Medicine, Saint Louis, MO, 63110.
Washington University in St. Louis · US

Funding

PROMOTERSR01GM092910 · NIGMS · WASHINGTON UNIVERSITY · PI Barak A Cohen · 2011 to 2026
$6.6M
High-throughput identification of causal variants underlying neuropsychiatric disease-related GWAS hitsR01MH122451 · NIMH · WASHINGTON UNIVERSITY · PI CORBO, JOSEPH · 2020 to 2024
$3.5M
High-throughput identification of causal variants underlying cardiac arrhythmia-related GWAS hitsR01HL149961 · NHLBI · WASHINGTON UNIVERSITY · PI CORBO, JOSEPH · 2020 to 2023
$2.9M
Elucidating the cis-regulatory grammar of human photoreceptorsR01EY030075 · NEI · WASHINGTON UNIVERSITY · PI CORBO, JOSEPH · 2020 to 2023
$2.2M
DISCOVERY OF DNA DETERMINANTS OF TRANSCRIPTION FACTOR BINDING AND FUNCTION IN PHOR01GM121755 · NIGMS · WASHINGTON UNIVERSITY · PI WHITE, MICHAEL AARON · 2017 to 2021
$1.5M
Interpreting function of non-coding sequences with synthetic biology and machine learningF31HG011431 · NHGRI · WASHINGTON UNIVERSITY · PI FRIEDMAN, RYAN ZACHARY · 2020 to 2022
$94k
NEI NIH HHS R01 EY030075NHGRI NIH HHS F31 HG011431NHLBI NIH HHS R01 HL149961NIGMS NIH HHS R01 GM092910NIGMS NIH HHS R01 GM121755NIMH NIH HHS R01 MH122451
6 · The paper itself

Abstract

PubMed holds no abstract for this paper.

Identifiers

PMID37662358
PMCPMC10473580
OpenAlexW4386055162

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.