Evidence map›Paper›PMID 37660217›Full record

ArticleScientific reports2023

Detecting schizophrenia with 3D structural brain MRI using deep learning.

Junhao Zhang, Vishwanatha M Rao, Ye Tian, Yanting Yang, Nicolas Acosta, Zihan Wan, Pin-Yu Lee, Chloe Zhang, Lawrence S Kegeles, Scott A Small and 1 more

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 25 papers, 3 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
25citing papers in PubMed, 3 pooled it
7.7field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

25 citing papers in PubMed, 3 syntheses or guidelines pooled it, 44 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 1 institution in 1 country.

Junhao ZhangDepartment of Biomedical Engineering, Columbia University, New York, NY, USA.
Vishwanatha M RaoDepartment of Biomedical Engineering, Columbia University, New York, NY, USA.
Ye TianDepartment of Biomedical Engineering, Columbia University, New York, NY, USA.
Yanting YangDepartment of Biomedical Engineering, Columbia University, New York, NY, USA.
Nicolas AcostaDepartment of Biomedical Engineering, Columbia University, New York, NY, USA.
Zihan WanDepartment of Applied Mathematics, Columbia University, New York, NY, USA.
Pin-Yu LeeDepartment of Biomedical Engineering, Columbia University, New York, NY, USA.
Chloe ZhangJericho High School, Jericho, NY, USA.
Lawrence S KegelesDepartment of Psychiatry, Columbia University, New York, NY, USA.
Scott A SmallDepartment of Neurology, Radiology, and Psychiatry, Columbia University, New York, NY, USA.
Jia GuoDepartment of Psychiatry, Columbia University, New York, NY, USA. jg3400@columbia.edu.
Columbia University · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Schizophrenia is a chronic neuropsychiatric disorder that causes distinct structural alterations within the brain. We hypothesize that deep learning applied to a structural neuroimaging dataset could detect disease-related alteration and improve classification and diagnostic accuracy. We tested this hypothesis using a single, widely available, and conventional T1-weighted MRI scan, from which we extracted the 3D whole-brain structure using standard post-processing methods. A deep learning model was then developed, optimized, and evaluated on three open datasets with T1-weighted MRI scans of patients with schizophrenia. Our proposed model outperformed the benchmark model, which was also trained with structural MR images using a 3D CNN architecture. Our model is capable of almost perfectly (area under the ROC curve = 0.987) distinguishing schizophrenia patients from healthy controls on unseen structural MRI scans. Regional analysis localized subcortical regions and ventricles as the most predictive brain regions. Subcortical structures serve a pivotal role in cognitive, affective, and social functions in humans, and structural abnormalities of these regions have been associated with schizophrenia. Our finding corroborates that schizophrenia is associated with widespread alterations in subcortical brain structure and the subcortical structural information provides prominent features in diagnostic classification. Together, these results further demonstrate the potential of deep learning to improve schizophrenia diagnosis and identify its structural neuroimaging signatures from a single, standard T1-weighted brain MRI.

Indexed as

Deep LearningImaging, Three-DimensionalMagnetic Resonance ImagingSchizophreniaAdolescentAdultAgedCase-Control StudiesFemaleHumansMaleMiddle AgedNeuroimagingYoung Adult

Identifiers

PMID37660217
PMCPMC10475022
OpenAlexW4386393049

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.